RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 GPNMBQ14956 572 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 NIPA1Q7RTP0 329 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 TRIM22Q8IYM9 498 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 REXO1Q8N1G1 1221 aaKnown RBP18.79■□□□□ 0.6
LINC00404-201ENST00000418660 CCDC148Q8NFR7 591 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 WNT8BQ93098 351 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 SDF4Q9BRK5 362 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 LARP6Q9BRS8 491 aaKnown RBP18.79■□□□□ 0.6
LINC00404-201ENST00000418660 JPH1Q9HDC5 661 aaPredicted RBP18.79■□□□□ 0.6
LINC00404-201ENST00000418660 MSRAQ9UJ68 235 aa18.79■□□□□ 0.6
LINC00404-201ENST00000418660 SCN5AQ14524 2016 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 CPLX1O14810 134 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 ADAMTS3O15072 1205 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 TREHO43280 583 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 CXCL10P02778 98 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 CYP3A4P08684 503 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 SSRP1Q08945 709 aaKnown RBP18.78■□□□□ 0.6
LINC00404-201ENST00000418660 ZNF618Q5T7W0 954 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 TRAF7Q6Q0C0 670 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 CRYGNQ8WXF5 182 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 SMARCAD1Q9H4L7 1026 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 ZNF576Q9H609 170 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 AGO4Q9HCK5 861 aaKnown RBP18.78■□□□□ 0.6
LINC00404-201ENST00000418660 SH3GLB2Q9NR46 395 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 SETD4Q9NVD3 440 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 SLC9A2Q9UBY0 812 aa18.78■□□□□ 0.6
LINC00404-201ENST00000418660 NBNO60934 754 aa18.77■□□□□ 0.6
LINC00404-201ENST00000418660 BAIAP3O94812 1187 aa18.77■□□□□ 0.6
LINC00404-201ENST00000418660 ATP2A2P16615 1042 aaKnown RBP18.77■□□□□ 0.6
LINC00404-201ENST00000418660 THPOP40225 353 aa18.77■□□□□ 0.6
LINC00404-201ENST00000418660 CPLX2Q6PUV4 134 aaKnown RBP18.77■□□□□ 0.6
LINC00404-201ENST00000418660 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
LINC00404-201ENST00000418660 VPS54Q9P1Q0 977 aa18.77■□□□□ 0.6
LINC00404-201ENST00000418660 EMSYQ7Z589 1322 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 NRCAMQ92823 1304 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 FAM86B1E9PN63 330 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 LGR5O75473 907 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 FAM86B2P0C5J1 330 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 ADAM17P78536 824 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 STK3Q13188 491 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 ITGB3BPQ13352 177 aaPredicted RBP18.76■□□□□ 0.59
LINC00404-201ENST00000418660 CNKSR3Q6P9H4 555 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 PLA2G4DQ86XP0 818 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 PHOSPHO2Q8TCD6 241 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 LMBR1Q8WVP7 490 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 GLG1Q92896 1179 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 SLC9A7Q96T83 725 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 PCDHA11Q9Y5I1 949 aa18.76■□□□□ 0.59
LINC00404-201ENST00000418660 IGLV3-22A0A075B6J6 115 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 RSPH10B2B2RC85 870 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 CAND2O75155 1236 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 DEXIO95424 95 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 RSPH10BP0C881 870 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 ACTR2P61160 394 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 GRIN2CQ14957 1233 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 MYLIPQ8WY64 445 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 IL17RAQ96F46 866 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 NKX2-4Q9H2Z4 354 aa18.75■□□□□ 0.59
LINC00404-201ENST00000418660 YBX2Q9Y2T7 364 aaKnown RBP18.75■□□□□ 0.59
LINC00404-201ENST00000418660 TRIP12Q14669 1992 aaPredicted RBP18.75■□□□□ 0.59
LINC00404-201ENST00000418660 ATG7O95352 703 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 MARK3P27448 753 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 RABGGTBP53611 331 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 NLRP5P59047 1200 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 PPFIA1Q13136 1202 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 MBTPS1Q14703 1052 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 ANKRD1Q15327 319 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 RASGRP4Q8TDF6 673 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 PCYT2Q99447 389 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 AZI2Q9H6S1 392 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 SLC28A3Q9HAS3 691 aa18.74■□□□□ 0.59
LINC00404-201ENST00000418660 ABHD14A-ACY1A0A1B0GW23 586 aa18.73■□□□□ 0.59
LINC00404-201ENST00000418660 CIITAP33076 1130 aa18.73■□□□□ 0.59
LINC00404-201ENST00000418660 KCNJ6P48051 423 aa18.73■□□□□ 0.59
LINC00404-201ENST00000418660 SETQ01105 290 aaPredicted RBP18.73■□□□□ 0.59
LINC00404-201ENST00000418660 PLPPR4Q7Z2D5 763 aa18.73■□□□□ 0.59
LINC00404-201ENST00000418660 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
LINC00404-201ENST00000418660 TNPO1Q92973 898 aaKnown RBP18.73■□□□□ 0.59
LINC00404-201ENST00000418660 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
LINC00404-201ENST00000418660 TPCN1Q9ULQ1 816 aa18.73■□□□□ 0.59
LINC00404-201ENST00000418660 IPO5O00410 1097 aaKnown RBP18.72■□□□□ 0.59
LINC00404-201ENST00000418660 DHX15O43143 795 aaKnown RBP18.72■□□□□ 0.59
LINC00404-201ENST00000418660 PFKFB2O60825 505 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 EFCAB14O75071 495 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 CDKL5O76039 1030 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 FOSL2P15408 326 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 STAT5BP51692 787 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 WDR5P61964 334 aaKnown RBP18.72■□□□□ 0.59
LINC00404-201ENST00000418660 SCRN1Q12765 414 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 IKBKEQ14164 716 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 GRIK4Q16099 956 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 HERC6Q8IVU3 1022 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 ZNF577Q9BSK1 485 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 TBC1D22BQ9NU19 505 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 PCDHA4Q9UN74 947 aa18.72■□□□□ 0.59
LINC00404-201ENST00000418660 LAMA2P24043 3122 aaKnown RBP18.72■□□□□ 0.59
LINC00404-201ENST00000418660 IGKV6D-21A0A0A0MT36 114 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 RRN3P2A6NIE6 340 aa18.71■□□□□ 0.59
LINC00404-201ENST00000418660 DDX39AO00148 427 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms