RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FRA10AC1Q70Z53 315 aa12.12□□□□□ -0.47
PTCH1-205ENST00000418258 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 SUCLA2Q9P2R7 463 aaPredicted RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
PTCH1-205ENST00000418258 GUCY2DQ02846 1103 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-205ENST00000418258 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-205ENST00000418258 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 PHLDB3Q6NSJ2 640 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 SMYD4Q8IYR2 804 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-205ENST00000418258 SPZ1Q9BXG8 430 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 GOLGA8KD6RF30 607 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 GFPT2O94808 682 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 ASNSP08243 561 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-205ENST00000418258 MSH2P43246 934 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 UNC5CLQ8IV45 518 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 SCN4BQ8IWT1 228 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
PTCH1-205ENST00000418258 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 GBP5Q96PP8 586 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 SLC7A5P2Q9GIP4 190 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-205ENST00000418258 ADD2P35612 726 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 DYNLL2Q96FJ2 89 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 FAN1Q9Y2M0 1017 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 PPP2R2CQ9Y2T4 447 aa12.11□□□□□ -0.47
PTCH1-205ENST00000418258 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
PTCH1-205ENST00000418258 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 ZHX2Q9Y6X8 837 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 TRAPPC10P48553 1259 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 KPNA2P52292 529 aaKnown RBP12.1□□□□□ -0.47
PTCH1-205ENST00000418258 NLRP10Q86W26 655 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 PPP1R2P3Q6NXS1 205 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 PROSER3Q2NL68 480 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 RMDN2Q96LZ7 410 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 IL9RQ01113 521 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 COA1Q9GZY4 146 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 GDAQ9Y2T3 454 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 CYP4F22Q6NT55 531 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 DHTKD1Q96HY7 919 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-205ENST00000418258 PAMP19021 973 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 CDK8P49336 464 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 PEX3P56589 373 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 GRAPQ13588 217 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 SPOPLQ6IQ16 392 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-205ENST00000418258 HOXC10Q9NYD6 342 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 DONSONQ9NYP3 566 aa12.1□□□□□ -0.47
PTCH1-205ENST00000418258 NLRP1Q9C000 1473 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 PLA2G4BP0C869 781 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 YWHAHQ04917 246 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 MTMR1Q13613 665 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 CXorf38Q8TB03 319 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 ZBTB7AO95365 584 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 GH2P01242 217 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 NNMTP40261 264 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 GNGT1P63211 74 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 TSPY1Q01534 308 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 ZMYM1Q5SVZ6 1142 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 EXT2Q93063 718 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 FKBP3Q00688 224 aaKnown RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 SLFN12LQ6IEE8 588 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 P2RX5Q93086 422 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 ZWILCHQ9H900 591 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 SUGT1Q9Y2Z0 365 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 NPHP4O75161 1426 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 GOLGA8IPA6NC78 632 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 GOLGA8JA6NMD2 632 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 PRKAB2O43741 272 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 TOM1L1O75674 476 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 ZNF445P59923 1031 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 PTPRTO14522 1441 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 HSPA8P11142 646 aaKnown RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-205ENST00000418258 FSD1LQ9BXM9 530 aa12.09□□□□□ -0.47
PTCH1-205ENST00000418258 CTTNQ14247 550 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 BRD3Q15059 726 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TMED2Q15363 201 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 LRRC8AQ8IWT6 810 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 CCDC124Q96CT7 223 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 HNRNPCL2B2RXH8 293 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms