RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 DHX29Q7Z478 1369 aaKnown RBP5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 ANKRD30BQ9BXX2 1392 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 NCANO14594 1321 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 ARNTLO00327 626 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 SGSM2O43147 1006 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 SCG5P05408 212 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 C8BP07358 591 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 LCP1P13796 627 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 BUD31P41223 144 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 GRIA2P42262 883 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 GTF2A2P52657 109 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 PPP2R2AP63151 447 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 DDR2Q16832 855 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 MROH9Q5TGP6 573 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 ERICH6BQ5W0A0 696 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 SAPCD2Q86UD0 394 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 ZC3H18Q86VM9 953 aaKnown RBP5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 NLRP10Q86W26 655 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 KREMEN2Q8NCW0 462 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 RCBTB1Q8NDN9 531 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 TRIM55Q9BYV6 548 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 CLDND1Q9NY35 253 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 PODXL2Q9NZ53 605 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 RTEL1Q9NZ71 1219 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 FBXL7Q9UJT9 491 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 LMTK2Q8IWU2 1503 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 MROH2AA6NES4 1674 aa5.28□□□□□ -1.56
HMGB3P20-201ENST00000417997 KIF3BO15066 747 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 SMARCA5O60264 1052 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 SYN1P17600 705 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 STAT5AP42229 794 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 HTRA3P83110 453 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 LSAMPQ13449 338 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 NT5DC1Q5TFE4 455 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 DENND5AQ6IQ26 1287 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 TTLL7Q6ZT98 887 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 STK32CQ86UX6 486 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 SLC43A3Q8NBI5 491 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 KCTD13Q8WZ19 329 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 SYT3Q9BQG1 590 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 NTMQ9P121 344 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 CLTCQ00610 1675 aaKnown RBP5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 PREX1Q8TCU6 1659 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 ABCC3O15438 1527 aa5.27□□□□□ -1.57
HMGB3P20-201ENST00000417997 TRPM1Q7Z4N2 1603 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 ATP10AO60312 1499 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 IFT172Q9UG01 1749 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 YEATS2Q9ULM3 1422 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 A0A1W2PQU0 124 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 STK10O94804 968 aaKnown RBP5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 SLC6A11P48066 632 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 SARSP49591 514 aaKnown RBP5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 CAP1Q01518 475 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 HSP90AA2PQ14568 343 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 USP53Q70EK8 1073 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 RIOX2Q8IUF8 465 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 CARFQ8N187 725 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 GORASP1Q9BQQ3 440 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 X6R8D5 127 aa5.26□□□□□ -1.57
HMGB3P20-201ENST00000417997 CFAP65Q6ZU64 1925 aaKnown RBP5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 AGLP35573 1532 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 SH3D21A4FU49 640 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 H7BY64 318 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 HGSO14964 777 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 PRODHO43272 600 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 DGKIO75912 1065 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 RAPGEF3O95398 923 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 GJA9P57773 515 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 CHRNA2Q15822 529 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 UBXN11Q5T124 520 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 SLC35F1Q5T1Q4 408 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 STEAP3Q658P3 488 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 FRMD5Q7Z6J6 570 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 DDX1Q92499 740 aaKnown RBP5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 TEPSINQ96N21 525 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 GMLQ99445 158 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 LAMC1P11047 1609 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 SIGLEC1Q9BZZ2 1709 aa5.25□□□□□ -1.57
HMGB3P20-201ENST00000417997 MADDQ8WXG6 1647 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 U2SURPO15042 1029 aaKnown RBP5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 KLF4O43474 513 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 DLX2Q07687 328 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 FERMT3Q86UX7 667 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 MIB1Q86YT6 1006 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 FAM126BQ8IXS8 530 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 CXorf38Q8TB03 319 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 C1orf159Q96HA4 380 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 AARSD1Q9BTE6 412 aaKnown RBP5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 C11orf84Q9BUA3 381 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 BDH2Q9BUT1 245 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 PHF20Q9BVI0 1012 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 PCDH18Q9HCL0 1135 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 SPATA6Q9NWH7 488 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 PCDHB4Q9Y5E5 795 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 RALGAPBQ86X10 1494 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 NEURL4Q96JN8 1562 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms