RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 NANOS1Q8WY41 292 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 UBXN4Q92575 508 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 ASIC4Q96FT7 647 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 ZDHHC15Q96MV8 337 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 TRERF1Q96PN7 1200 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 RASSF4Q9H2L5 321 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 XPNPEP3Q9NQH7 507 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 DNAJB12Q9NXW2 375 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 INPP5FQ9Y2H2 1132 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 CACNA1HO95180 2353 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 PHIPQ8WWQ0 1821 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 DOCK1Q14185 1865 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 ZNF292O60281 2723 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 CDC14CA4D256 554 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 SLC15A5A6NIM6 579 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 F6X3S4 739 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 HOXC6P09630 235 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 SDHBP21912 280 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 CYP2C18P33260 490 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 HMGCS2P54868 508 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 HERVK_113P62684 666 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 ATP11AP98196 1134 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 SMAD2Q15796 467 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 FOXR1Q6PIV2 292 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 SV2AQ7L0J3 742 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 CNPY4Q8N129 248 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 SLC9A7Q96T83 725 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 POLR3GLQ9BT43 218 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 TANGO6Q9C0B7 1094 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 GREM2Q9H772 168 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 YY1AP1Q9H869 796 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
ECHDC1-206ENST00000417628 TRANK1O15050 2925 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 RIF1Q5UIP0 2472 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 A0A096LPE4 126 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 A0A1W2PPZ6 126 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 CYSRT1A8MQ03 144 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 TLR3O15455 904 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 CTNND1O60716 968 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 RARBP10826 455 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 CHRNDQ07001 517 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 TCP10Q12799 353 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 PAK2Q13177 524 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 WDR78Q5VTH9 848 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 OLFML2BQ68BL8 750 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 EP400NLQ6ZTU2 488 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 SV2BQ7L1I2 683 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 CCDC84Q86UT8 332 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 NPLOC4Q8TAT6 608 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 SPACA7Q96KW9 195 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 PAGR1Q9BTK6 254 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 IGFLR1Q9H665 355 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 PANK3Q9H999 370 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 TMEM51Q9NW97 253 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 ADAMTS1Q9UHI8 967 aa6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 LRRFIP2Q9Y608 721 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-206ENST00000417628 A0A1B0GUL6 1792 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 KIF28PB7ZC32 967 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 SNAP23O00161 211 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 STXBP3O00186 592 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 SIN3BO75182 1162 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 PGK1P00558 417 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 CELA3AP09093 270 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 RGS3P49796 1198 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 ACLYP53396 1101 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 PCBP4P57723 403 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 CCNA1P78396 465 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 GAS6Q14393 721 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 GRB14Q14449 540 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 APOBEC3HQ6NTF7 200 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 SPRED2Q7Z698 418 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 RPUSD2Q8IZ73 545 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 TTLL11Q8NHH1 800 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 PABPC5Q96DU9 382 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 MPHOSPH8Q99549 860 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 PLCD4Q9BRC7 762 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 SEMA4AQ9H3S1 761 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 HIPK3Q9H422 1215 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 RBPJLQ9UBG7 517 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 TNKSO95271 1327 aa6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 ASH1LQ9NR48 2969 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-206ENST00000417628 MAST4O15021 2626 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 MYO15AQ9UKN7 3530 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 MINDY4BA8MYZ0 360 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 MAST3O60307 1309 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 LETM1O95202 739 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 BMP4P12644 408 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 DNAJA1P31689 397 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 DMTNQ08495 405 aa6.63□□□□□ -1.35
ECHDC1-206ENST00000417628 TBC1D8BQ0IIM8 1120 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms