RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 SKIV2LQ15477 1246 aaKnown RBP17■□□□□ 0.31
PHRF1-203ENST00000416188 LGSNQ5TDP6 509 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 FLT1P17948 1338 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 CTAGE3PQ8IX95 158 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 LBHD1Q9BQE6 289 aaPredicted RBP17■□□□□ 0.31
PHRF1-203ENST00000416188 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
PHRF1-203ENST00000416188 H2AFZP0C0S5 128 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 CEP85LQ5SZL2 805 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 H2AFVQ71UI9 128 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 MGARPQ8TDB4 240 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 FAM167AQ96KS9 214 aa17■□□□□ 0.31
PHRF1-203ENST00000416188 COPB1P53618 953 aaKnown RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 GKAP1Q5VSY0 366 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 METTL14Q9HCE5 456 aaKnown RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 CTNNA1P35221 906 aaKnown RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 MAP1SQ66K74 1059 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 ANKRD42Q8N9B4 389 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 LPAR1Q92633 364 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 NEDD4P46934 1319 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 GSG1L2A8MUP6 293 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 ATP11AP98196 1134 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 GABPB2Q8TAK5 448 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 GIPC1O14908 333 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 JAK3P52333 1124 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 DPCR1Q3MIW9 517 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 SCYL2Q6P3W7 929 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 USP17L6PQ6QN14 398 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 SMYD4Q8IYR2 804 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 GTF3C2Q8WUA4 911 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-203ENST00000416188 GSDMAQ96QA5 445 aa16.99■□□□□ 0.31
PHRF1-203ENST00000416188 CASP14P31944 242 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 CXCL9Q07325 125 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 BRD3Q15059 726 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 MCUR1Q96AQ8 359 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 TUBGCP2Q9BSJ2 902 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 WDR46O15213 610 aaKnown RBP16.98■□□□□ 0.31
PHRF1-203ENST00000416188 NR5A1Q13285 461 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 C12orf60Q5U649 245 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 CNOT6LQ96LI5 555 aaKnown RBP16.98■□□□□ 0.31
PHRF1-203ENST00000416188 DPH5Q9H2P9 285 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 POLLQ9UGP5 575 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 RGS16O15492 202 aaPredicted RBP16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ELF1P32519 619 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 MAN1A1P33908 653 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 GTF2A2P52657 109 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 FBXO33Q7Z6M2 555 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ARHGEF2Q92974 986 aaKnown RBP16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ANKRD36BP1Q96IX9 119 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 AK8Q96MA6 479 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 MTIF3Q9H2K0 278 aaKnown RBP16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ARHGEF37A1IGU5 675 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 DENND3A2RUS2 1198 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 OSTNP61366 133 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 PTPN21Q16825 1174 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 QRICH1Q2TAL8 776 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 SPATA33Q96N06 139 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 POLR3EQ9NVU0 708 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 ARHGAP23Q9P227 1491 aa16.98■□□□□ 0.31
PHRF1-203ENST00000416188 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 N4BP1O75113 896 aaKnown RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 GABPAQ06546 454 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 RSAD2Q8WXG1 361 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 RSRC1Q96IZ7 334 aaKnown RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 PPP6R2O75170 966 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 TCP1P17987 556 aaKnown RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 PDIA6Q15084 440 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 PYCARDQ9ULZ3 195 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 PLCB1Q9NQ66 1216 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 GAP43P17677 238 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 CDC25AP30304 524 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 GRAMD1CQ8IYS0 662 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 ENAHQ8N8S7 591 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-203ENST00000416188 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
PHRF1-203ENST00000416188 MMP1P03956 469 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 GOLGA8FQ08AF8 430 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 GOLGA8DPQ0D2H9 430 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 PSMD6Q15008 389 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 RAB20Q9NX57 234 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 INPP5FQ9Y2H2 1132 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms