RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 H3BS24 57 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 NOP56O00567 594 aaKnown RBP7.74□□□□□ -1.17
EPHA4-204ENST00000415749 FOXN1O15353 648 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 CYP27B1O15528 508 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 SRFP11831 508 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 HOXA10P31260 410 aaPredicted RBP7.74□□□□□ -1.17
EPHA4-204ENST00000415749 SOX5P35711 763 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 ZNF445P59923 1031 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 PRKCQQ04759 706 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 SNW1Q13573 536 aaKnown RBP7.74□□□□□ -1.17
EPHA4-204ENST00000415749 SLC10A6Q3KNW5 377 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 TMC3Q7Z5M5 1100 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 USHBP1Q8N6Y0 703 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 ZNF655Q8N720 491 aaPredicted RBP7.74□□□□□ -1.17
EPHA4-204ENST00000415749 PPP1R14AQ96A00 147 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 RCC1LQ96I51 464 aaKnown RBP7.74□□□□□ -1.17
EPHA4-204ENST00000415749 RPS6KC1Q96S38 1066 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 DUSP15Q9H1R2 295 aaPredicted RBP7.74□□□□□ -1.17
EPHA4-204ENST00000415749 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 LRP2BPQ9P2M1 347 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 VAV3Q9UKW4 847 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 MAP3K19Q56UN5 1328 aa7.74□□□□□ -1.17
EPHA4-204ENST00000415749 C5P01031 1676 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 MEGF6O75095 1541 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 GLTPD2A6NH11 291 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 PDE8AO60658 829 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 PRAMEF1O95521 474 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 CTCFP49711 727 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 PABPC4Q13310 644 aaKnown RBP eCLIP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 ITPK1Q13572 414 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 TTF1Q15361 905 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 MSMPQ1L6U9 139 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 CWF19L1Q69YN2 538 aaKnown RBP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 TMPRSS7Q7RTY8 843 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 TSPYL5Q86VY4 417 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 HDAC8Q9BY41 377 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 TERF2IPQ9NYB0 399 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 LTN1O94822 1766 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 N4BP2Q86UW6 1770 aaPredicted RBP7.73□□□□□ -1.17
EPHA4-204ENST00000415749 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
EPHA4-204ENST00000415749 C4BP0C0L5 1744 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 GSNP06396 782 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 TPP2P29144 1249 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-204ENST00000415749 PMLP29590 882 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 NFE2Q16621 373 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-204ENST00000415749 AOC3Q16853 763 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 MAP9Q49MG5 647 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 FIBCD1Q8N539 461 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 ZBTB38Q8NAP3 1195 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-204ENST00000415749 BVESQ8NE79 360 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 ADCY4Q8NFM4 1077 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 COG3Q96JB2 828 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 NOL6Q9H6R4 1146 aaKnown RBP7.72□□□□□ -1.17
EPHA4-204ENST00000415749 SEMA3GQ9NS98 782 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 ASAP1Q9ULH1 1129 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 AKT3Q9Y243 479 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 PCDH11XQ9BZA7 1347 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 PCDH11YQ9BZA8 1340 aa7.72□□□□□ -1.17
EPHA4-204ENST00000415749 UBR3Q6ZT12 1888 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 SSU72P8A0A1W2PR75 194 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 SHISA3A0PJX4 238 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 TSPAN6O43657 245 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 ADCY3O60266 1144 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 GYS1P13807 737 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 RFC4P35249 363 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 EPHB1P54762 984 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 PPP2R5AQ15172 486 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 LONRF2Q1L5Z9 754 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 ARHGEF39Q8N4T4 335 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 ATL2Q8NHH9 583 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 BRF1Q92994 677 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 RELTQ969Z4 430 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 ABHD8Q96I13 439 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 APEX2Q9UBZ4 518 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 CGGBP1Q9UFW8 167 aaPredicted RBP7.71□□□□□ -1.18
EPHA4-204ENST00000415749 DUSP13Q9UII6 198 aa7.71□□□□□ -1.18
EPHA4-204ENST00000415749 CD163L1Q9NR16 1453 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 MEIS1O00470 390 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 CREB3O43889 395 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 ADAM23O75077 832 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 ENDOUP21128 410 aaKnown RBP7.7□□□□□ -1.18
EPHA4-204ENST00000415749 CHRNA5P30532 468 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 L1CAMP32004 1257 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 GNALP38405 381 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 LBX1P52954 281 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 POU4F1Q01851 419 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 GRB10Q13322 594 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 PPP2R5DQ14738 602 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 RRS1Q15050 365 aaKnown RBP7.7□□□□□ -1.18
EPHA4-204ENST00000415749 WWC2Q6AWC2 1192 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 CCSAPQ6IQ19 270 aaPredicted RBP7.7□□□□□ -1.18
EPHA4-204ENST00000415749 RNF180Q86T96 592 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 VSIG10LQ86VR7 867 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 TCTN2Q96GX1 697 aa7.7□□□□□ -1.18
EPHA4-204ENST00000415749 TMOD3Q9NYL9 352 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms