RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PCNX4Q63HM2 1172 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 XRRA1Q6P2D8 792 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 CLP1Q92989 425 aaKnown RBP14.05□□□□□ -0.16
LIMS2-210ENST00000413578 ZNF689Q96CS4 500 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-210ENST00000413578 IL17RAQ96F46 866 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 ZNF215Q9UL58 517 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-210ENST00000413578 SUPT16HQ9Y5B9 1047 aaKnown RBP14.05□□□□□ -0.16
LIMS2-210ENST00000413578 MYH6P13533 1939 aa14.05□□□□□ -0.16
LIMS2-210ENST00000413578 MYH7BA7E2Y1 1941 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 IFIT3O14879 490 aaKnown RBP14.04□□□□□ -0.16
LIMS2-210ENST00000413578 DCXO43602 365 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 RB1P06400 928 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 BMPR1AP36894 532 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 PTH1RQ03431 593 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 TRDNQ13061 729 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 LPIN1Q14693 890 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 TAF2Q6P1X5 1199 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 USP17L6PQ6QN14 398 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 RUFY4Q6ZNE9 571 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 ADHFE1Q8IWW8 467 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 CRIPAKQ8N1N5 446 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 FIBCD1Q8N539 461 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 IGDCC4Q8TDY8 1250 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 SPZ1Q9BXG8 430 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 LMAN2LQ9H0V9 348 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
LIMS2-210ENST00000413578 MYO7AQ13402 2215 aa14.04□□□□□ -0.16
LIMS2-210ENST00000413578 MBLAC1A4D2B0 266 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-210ENST00000413578 E7EWF7 191 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 GRM6O15303 877 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 NCK2O43639 380 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 GHRP10912 638 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 KCNA2P16389 499 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 PDE4AP27815 886 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 WTAPQ15007 396 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 MARCH8Q5T0T0 291 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 UTP14CQ5TAP6 766 aaKnown RBP14.03□□□□□ -0.16
LIMS2-210ENST00000413578 MAP3K14Q99558 947 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 C11orf84Q9BUA3 381 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-210ENST00000413578 RWDD3Q9Y3V2 267 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 ADGRA3Q8IWK6 1321 aa14.03□□□□□ -0.16
LIMS2-210ENST00000413578 ENPP3O14638 875 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 ATP9AO75110 1047 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 SMARCA1P28370 1054 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 CTNNB1P35222 781 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 TCF7P36402 384 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-210ENST00000413578 DLX2Q07687 328 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-210ENST00000413578 HYAL1Q12794 435 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 CAMK1Q14012 370 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 SMAD2Q15796 467 aaKnown RBP14.02□□□□□ -0.17
LIMS2-210ENST00000413578 FBXO47Q5MNV8 452 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 TTC22Q5TAA0 569 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 MB21D2Q8IYB1 491 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-210ENST00000413578 NCOA7Q8NI08 942 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 LINC01599Q8WXQ3 324 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 GPRASP2Q96D09 838 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 CLDND1Q9NY35 253 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 FAM50BQ9Y247 325 aa14.02□□□□□ -0.17
LIMS2-210ENST00000413578 BAZ2BQ9UIF8 2168 aaKnown RBP14.02□□□□□ -0.17
LIMS2-210ENST00000413578 GSTTP1A0A1W2PQM5 241 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 ERICH2A1L162 156 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 DGKIO75912 1065 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 MMP1P03956 469 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 ITGB5P18084 799 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 CHMLP26374 656 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 IRS1P35568 1242 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 SP4Q02446 784 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 PPFIA1Q13136 1202 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 CATIPQ7Z7H3 387 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
LIMS2-210ENST00000413578 NLRX1Q86UT6 975 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 GIMAP8Q8ND71 665 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-210ENST00000413578 EXOC6Q8TAG9 804 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 SMARCC2Q8TAQ2 1214 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 LY9Q9HBG7 655 aa14.01□□□□□ -0.17
LIMS2-210ENST00000413578 MBTPS2O43462 519 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 TBX10O75333 385 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 DDAH1O94760 285 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
LIMS2-210ENST00000413578 SART3Q15020 963 aaKnown RBP14□□□□□ -0.17
LIMS2-210ENST00000413578 GRIK4Q16099 956 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 TSHZ1Q6ZSZ6 1077 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 ALYREFQ86V81 257 aaKnown RBP14□□□□□ -0.17
LIMS2-210ENST00000413578 PIBF1Q8WXW3 757 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 SEPT1Q8WYJ6 367 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 PCYT2Q99447 389 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 PLVAPQ9BX97 442 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 KCNH6Q9H252 994 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 AGO3Q9H9G7 860 aaKnown RBP14□□□□□ -0.17
LIMS2-210ENST00000413578 ERAP1Q9NZ08 941 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 TUBE1Q9UJT0 475 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 UBIAD1Q9Y5Z9 338 aa14□□□□□ -0.17
LIMS2-210ENST00000413578 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 SGSM2O43147 1006 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 NHLH1Q02575 133 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 SMAD4Q13485 552 aaKnown RBP13.99□□□□□ -0.17
LIMS2-210ENST00000413578 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
LIMS2-210ENST00000413578 HFE2Q6ZVN8 426 aa13.99□□□□□ -0.17
LIMS2-210ENST00000413578 RTN4RL1Q86UN2 441 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms