RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 IGKV6D-21A0A0A0MT36 114 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 KIF28PB7ZC32 967 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 IPO5O00410 1097 aaKnown RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 ST18O60284 1047 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 HBP1O60381 514 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 LGALS2P05162 132 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 CPA1P15085 419 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 TCF7P36402 384 aaPredicted RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 STAT5BP51692 787 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 AK2P54819 239 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 PSMC6P62333 389 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 CCT2P78371 535 aaKnown RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 IRX5P78411 483 aaPredicted RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 ADAM17P78536 824 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 HMGN5P82970 282 aaKnown RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 SEMA3FQ13275 785 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 ORC2Q13416 577 aaPredicted RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 COL9A3Q14050 684 aaPredicted RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 TRIM29Q14134 588 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 NONOQ15233 471 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP54-202ENST00000413442 RABEP1Q15276 862 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 SHHQ15465 462 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 RAB30Q15771 203 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 Q4G0T1 1027 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 FAM26DQ5JW98 314 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 TMEM240Q5SV17 173 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 TMEM63BQ5T3F8 832 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 TYW1BQ6NUM6 668 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 SERINC5Q86VE9 423 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 PLA2G4DQ86XP0 818 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 IL31RAQ8NI17 732 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 APBB2Q92870 758 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 GLG1Q92896 1179 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 ATP6V0A1Q93050 837 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 PHKBQ93100 1093 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 RNPC3Q96LT9 517 aaKnown RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 FAM20AQ96MK3 541 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 UPF3BQ9BZI7 483 aaKnown RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 TRPV6Q9H1D0 765 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 RNPEPQ9H4A4 650 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 AGO4Q9HCK5 861 aaKnown RBP7.26□□□□□ -1.25
USP54-202ENST00000413442 CEP131Q9UPN4 1083 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 PPME1Q9Y570 386 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 PCDHA10Q9Y5I2 948 aa7.26□□□□□ -1.25
USP54-202ENST00000413442 COL1A2P08123 1366 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 IGLV3-22A0A075B6J6 115 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 GSTTP1A0A1W2PQM5 241 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 hCG_1642624A0A1W2PR95 340 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 M0R2N6 131 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 MAGEB2O15479 319 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 ATP9AO75110 1047 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 BAG4O95429 457 aaKnown RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 CXCL10P02778 98 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 PSAPP07602 524 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 CKBP12277 381 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 PDIA4P13667 645 aaKnown RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 CSF2RAP15509 400 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 ITGB8P26012 769 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 JAK3P52333 1124 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 SCRN1Q12765 414 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 IKBKEQ14164 716 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 SAFBQ15424 915 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP54-202ENST00000413442 UBE2SQ16763 222 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 ZNF484Q5JVG2 852 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 IER5Q5VY09 327 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 JAKMIP3Q5VZ66 844 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 GDF6Q6KF10 455 aaPredicted RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 MIS18BP1Q6P0N0 1132 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 CNKSR3Q6P9H4 555 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 ZNF365Q70YC5 407 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 RAB11FIP4Q86YS3 637 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 SLFN12Q8IYM2 578 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 BBXQ8WY36 941 aaPredicted RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 GTF3C6Q969F1 213 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 FAM167AQ96KS9 214 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 MBOAT7Q96N66 472 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 SLC9A7Q96T83 725 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP54-202ENST00000413442 ZNF577Q9BSK1 485 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 PHF20Q9BVI0 1012 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 NRBP2Q9NSY0 501 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 TRMT13Q9NUP7 481 aaKnown RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 ORC3Q9UBD5 711 aaPredicted RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 MSRAQ9UJ68 235 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 TPCN1Q9ULQ1 816 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 SLC4A7Q9Y6M7 1214 aa7.25□□□□□ -1.25
USP54-202ENST00000413442 DDX49Q9Y6V7 483 aaKnown RBP7.25□□□□□ -1.25
USP54-202ENST00000413442 CEP290O15078 2479 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 CCDC194A0A1B0GVG4 234 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 SMIM35A0A1B0GVV1 85 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 MBLAC1A4D2B0 266 aaPredicted RBP7.24□□□□□ -1.25
USP54-202ENST00000413442 RSPH10B2B2RC85 870 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 DHX15O43143 795 aaKnown RBP7.24□□□□□ -1.25
USP54-202ENST00000413442 RSPH10BP0C881 870 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 SMIM10L2AP0DMW4 78 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 SMIM10L2BP0DMW5 78 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 CYP2C18P33260 490 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 ACTR2P61160 394 aa7.24□□□□□ -1.25
USP54-202ENST00000413442 ZNF697Q5TEC3 545 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms