RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 F2P00734 622 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 FOSP01100 380 aaPredicted RBP7.12□□□□□ -1.27
NOD1-203ENST00000413433 GCP02774 474 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 SCG5P05408 212 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 ELNP15502 786 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
NOD1-203ENST00000413433 ASPAP45381 313 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 PURAQ00577 322 aaKnown RBP7.12□□□□□ -1.27
NOD1-203ENST00000413433 NRG1Q02297 640 aaPredicted RBP7.12□□□□□ -1.27
NOD1-203ENST00000413433 DPY19L1Q2PZI1 675 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 MINDY4Q4G0A6 757 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 LETMD1Q6P1Q0 360 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 PTF1AQ7RTS3 328 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 PPIL6Q8IXY8 311 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 TCP11L2Q8N4U5 519 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 SMC1BQ8NDV3 1235 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 RNF141Q8WVD5 230 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 C1orf159Q96HA4 380 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 GFOD1Q9NXC2 390 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 OBP2AQ9NY56 170 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 PCDHA8Q9Y5H6 950 aa7.12□□□□□ -1.27
NOD1-203ENST00000413433 IFRD1O00458 451 aaPredicted RBP7.11□□□□□ -1.27
NOD1-203ENST00000413433 VAMP4O75379 141 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PF4V1P10720 104 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PAX3P23760 479 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 IARSP41252 1262 aaKnown RBP7.11□□□□□ -1.27
NOD1-203ENST00000413433 LSSP48449 732 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 SOX4Q06945 474 aaPredicted RBP7.11□□□□□ -1.27
NOD1-203ENST00000413433 SCRN1Q12765 414 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PICALMQ13492 652 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 FDX2Q6P4F2 183 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 KCNT2Q6UVM3 1135 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 ACAD11Q709F0 780 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 CDH24Q86UP0 819 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
NOD1-203ENST00000413433 TPH2Q8IWU9 490 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 IFNL3Q8IZI9 196 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 IGSF22Q8N9C0 903 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 DNAJB8Q8NHS0 232 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 ARPC5LQ9BPX5 153 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 ZFYVE21Q9BQ24 234 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PHF20Q9BVI0 1012 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PRR13Q9NZ81 148 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 RCAN3Q9UKA8 241 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 PCOLCE2Q9UKZ9 415 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 RNF112Q9ULX5 631 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 ATP7BP35670 1465 aa7.11□□□□□ -1.27
NOD1-203ENST00000413433 KPNA1P52294 538 aaPredicted RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 POU4F1Q01851 419 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 DSG1Q02413 1049 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 TRAPPC3LQ5T215 181 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 CWF19L1Q69YN2 538 aaKnown RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 DTWD1Q8N5C7 304 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 C12orf50Q8NA57 414 aaPredicted RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 SMG8Q8ND04 991 aaKnown RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 TP53INP1Q96A56 240 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 LENG1Q96BZ8 264 aaPredicted RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 CLIP3Q96DZ5 547 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 SLC39A13Q96H72 371 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 AHCYL2Q96HN2 611 aaKnown RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 FUBP3Q96I24 572 aaKnown RBP eCLIP7.1□□□□□ -1.27
NOD1-203ENST00000413433 FBXL18Q96ME1 805 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 ALG1Q9BT22 464 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 SUGCTQ9HAC7 445 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 EMC7Q9NPA0 242 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 BSDC1Q9NW68 430 aaPredicted RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 THG1LQ9NWX6 298 aaKnown RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 PNMA8BQ9ULN7 279 aaPredicted RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 ANKRD6Q9Y2G4 727 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 COL14A1Q05707 1796 aaKnown RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 ABCA3Q99758 1704 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 TRPM3Q9HCF6 1732 aaPredicted RBP7.1□□□□□ -1.27
NOD1-203ENST00000413433 NWD2Q9ULI1 1742 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 SSH2Q76I76 1423 aa7.1□□□□□ -1.27
NOD1-203ENST00000413433 POLR3AO14802 1390 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 ADGRB2O60241 1585 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 MEGF11A6BM72 1044 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 DLL1O00548 723 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 MEFVO15553 781 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 DEAF1O75398 565 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 RECQLP46063 649 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 GPR85P60893 370 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 C10orf62Q5T681 223 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 ABHD17CQ6PCB6 329 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 RSPO2Q6UXX9 243 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 TOM1L2Q6ZVM7 507 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 TICAM2Q86XR7 235 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 VWCEQ96DN2 955 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 SLC13A1Q9BZW2 595 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 ASCC2Q9H1I8 757 aaPredicted RBP7.09□□□□□ -1.27
NOD1-203ENST00000413433 USP25Q9UHP3 1055 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 GIT1Q9Y2X7 761 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 COQ6Q9Y2Z9 468 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 ACTL7BQ9Y614 415 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 NRAPQ86VF7 1730 aa7.09□□□□□ -1.27
NOD1-203ENST00000413433 ALS2Q96Q42 1657 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms