RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 RHOBTB2Q9BYZ6 727 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 PDLIM7Q9NR12 457 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 TOPORSQ9NS56 1045 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 MKS1Q9NXB0 559 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 PRPF3O43395 683 aaKnown RBP6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 CLASP2O75122 1294 aaKnown RBP6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 ABLIM3O94929 683 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 CFBP00751 764 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 LTFP02788 710 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 SMAD3P84022 425 aaKnown RBP6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 SMAD2Q15796 467 aaKnown RBP6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 CLUL1Q15846 466 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 FIGNQ5HY92 759 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 FAM102BQ5T8I3 360 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 BICRALQ6AI39 1079 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 RIOX2Q8IUF8 465 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 SPPL2CQ8IUH8 684 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 TTC8Q8TAM2 541 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 UHMK1Q8TAS1 419 aaKnown RBP6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 PLCD4Q9BRC7 762 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZDHHC5Q9C0B5 715 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 ACSS2Q9NR19 701 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 RIC8BQ9NVN3 520 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 NUB1Q9Y5A7 615 aa6.28□□□□□ -1.4
HMGB3P31-201ENST00000413333 XPOTO43592 962 aaKnown RBP6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 NRDCO43847 1150 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 MAFKO60675 156 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 PEX14O75381 377 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 GNALP38405 381 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 PHC1P78364 1004 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 CYP4F8P98187 520 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 CHRNEQ04844 493 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 LRRC32Q14392 662 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 SEC23AQ15436 765 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 CHRNA2Q15822 529 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 BTBD8Q5XKL5 378 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 CC2D1AQ6P1N0 951 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 KCTD1Q719H9 257 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 CABP7Q86V35 215 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 TPH2Q8IWU9 490 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 TCEAL8Q8IYN2 117 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 OXR1Q8N573 874 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 ZNF610Q8N9Z0 462 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 RELTQ969Z4 430 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 SLC13A1Q9BZW2 595 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 RXFP1Q9HBX9 757 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 KCNH7Q9NS40 1196 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 ACSL6Q9UKU0 697 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 SIT1Q9Y3P8 196 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 B3GALT1Q9Y5Z6 326 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 MRFAP1Q9Y605 127 aa6.27□□□□□ -1.41
HMGB3P31-201ENST00000413333 GOLGA6CA6NDK9 693 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 GOLGA6BA6NDN3 693 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 PRAMEF25A6NGN4 478 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 FZD9O00144 591 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 HGSO14964 777 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 KDM1AO60341 852 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 H2AFYO75367 372 aaKnown RBP6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 RFPL1O75677 317 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 CYP17A1P05093 508 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 GOLGA6DP0CG33 693 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 PF4V1P10720 104 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 CD40P25942 277 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 TUSC3Q13454 348 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 ACAP2Q15057 778 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 FRMD7Q6ZUT3 714 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 MAGEB6Q8N7X4 407 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 PDZD8Q8NEN9 1154 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 RTF1Q92541 710 aaKnown RBP6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 DLG3Q92796 817 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 CAMKK2Q96RR4 588 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 SPOCK3Q9BQ16 436 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 SMOC1Q9H4F8 434 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 ZMAT4Q9H898 229 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 GOLGA6AQ9NYA3 693 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 MYOTQ9UBF9 498 aa6.26□□□□□ -1.41
HMGB3P31-201ENST00000413333 FITM1A5D6W6 292 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 FAM90A27PA6NNH2 459 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 MSTNO14793 375 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 PSPNO60542 156 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 BUB1BO60566 1050 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 COBLO75128 1261 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 CAND2O75155 1236 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 TADA3O75528 432 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 PROCP04070 461 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 RBP3P10745 1247 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 RECQLP46063 649 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 GALK1P51570 392 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 ERVFC1P60507 584 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 GRIN1Q05586 938 aa6.25□□□□□ -1.41
HMGB3P31-201ENST00000413333 ODF1Q14990 250 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms