RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-233	ENST00000412685	VEZT	Q9HBM0	779 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	IGLV3-22	A0A075B6J6	115 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	CFB	P00751	764 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	MARS	P56192	900 aa	Known RBP	18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	KCNMA1	Q12791	1236 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	KIF5A	Q12840	1032 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	TEX2	Q8IWB9	1127 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	TRIM59	Q8IWR1	403 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	EDEM3	Q9BZQ6	932 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	ANKZF1	Q9H8Y5	726 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	ARFGAP3	Q9NP61	516 aa		18.21	■□□□□ 0.51
HCG18-233	ENST00000412685	COL4A5	P29400	1685 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	DMTN	Q08495	405 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	CCDC174	Q6PII3	467 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	PPP4R3CP	Q6ZMV5	832 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	CACNA2D4	Q7Z3S7	1137 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	CDAN1	Q8IWY9	1227 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	PURB	Q96QR8	312 aa	Known RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	HDAC6	Q9UBN7	1215 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	DUSP10	Q9Y6W6	482 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	ATP1A1	P05023	1023 aa	Known RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	EIF4A3	P38919	411 aa	Known RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	CASP5	P51878	434 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	KIF11	P52732	1056 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	EDRF1	Q3B7T1	1238 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	CHURC1	Q8WUH1	139 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	TBC1D5	Q92609	795 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	POLR3C	Q9BUI4	534 aa	Predicted RBP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	TSGA10	Q9BZW7	698 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	TMEM39B	Q9GZU3	492 aa		18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
HCG18-233	ENST00000412685	CCDC151	A5D8V7	595 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	POTEB2	H3BUK9	544 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	EML1	O00423	815 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	ATP8B1	O43520	1251 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	ADAM9	Q13443	819 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	FKBP1C	Q5VVH2	108 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	PAPD7	Q5XG87	772 aa	Known RBP	18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	PDXDC1	Q6P996	788 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	SFR1	Q86XK3	245 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	MSANTD4	Q8NCY6	345 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	IFIH1	Q9BYX4	1025 aa	Known RBP	18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	RANBP17	Q9H2T7	1088 aa	Known RBP	18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	DEF6	Q9H4E7	631 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	VCPKMT	Q9H867	229 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	MACROD2	A1Z1Q3	448 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	TBC1D8	O95759	1140 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	POLR2M	P0CAP2	368 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	BRD3	Q15059	726 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	ARHGAP27	Q6ZUM4	889 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	WDR18	Q9BV38	432 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	BHMT2	Q9H2M3	363 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	SAR1B	Q9Y6B6	198 aa		18.19	■□□□□ 0.5
HCG18-233	ENST00000412685	LCA5L	O95447	670 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	ZYX	Q15942	572 aa	Known RBP	18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	MIGA2	Q7L4E1	593 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	RGL1	Q9NZL6	768 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	PCDHA13	Q9Y5I0	950 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	CETN3	O15182	167 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	AKR1B10	O60218	316 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	TBC1D12	O60347	775 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	NR2F2	P24468	414 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	PLA2G4A	P47712	749 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	GABPB1	Q06547	395 aa	Predicted RBP	18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	GPIHBP1	Q8IV16	184 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	SECISBP2L	Q93073	1101 aa	Known RBP	18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	CEP72	Q9P209	647 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	FAM184B	Q9ULE4	1060 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	RABGAP1	Q9Y3P9	1069 aa		18.18	■□□□□ 0.5
HCG18-233	ENST00000412685	USO1	O60763	962 aa	Known RBP	18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	SASH3	O75995	380 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	NOL4	O94818	638 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	EYA4	O95677	639 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	KNOP1	Q1ED39	458 aa	Known RBP	18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	PNKP	Q96T60	521 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	RUSC1	Q9BVN2	902 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	NLRC4	Q9NPP4	1024 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	RAB21	Q9UL25	225 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	DPEP1	P16444	411 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	KCNA3	P22001	575 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	CAP2	P40123	477 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	UTP14C	Q5TAP6	766 aa	Known RBP	18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	OTOP1	Q7RTM1	612 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	KCTD17	Q8N5Z5	321 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	NOA1	Q8NC60	698 aa	Known RBP	18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	HSD17B14	Q9BPX1	270 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	CRACR2A	Q9BSW2	395 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	LSM14B	Q9BX40	385 aa	Known RBP	18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	SH2D4A	Q9H788	454 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	ST7	Q9NRC1	585 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	TRAF3IP3	Q9Y228	551 aa		18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	MRPL11	Q9Y3B7	192 aa	Known RBP	18.17	■□□□□ 0.5
HCG18-233	ENST00000412685	ANO9	A1A5B4	782 aa		18.16	■□□□□ 0.5
HCG18-233	ENST00000412685	RSPH10B2	B2RC85	870 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms