RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 EPHA7Q15375 998 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 STXBP2Q15833 593 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 CT47A1Q5JQC4 288 aaPredicted RBP12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 MIER3Q7Z3K6 550 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 GPRC5AQ8NFJ5 357 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 MTRQ99707 1265 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 TRIM9Q9C026 710 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 UNC45AQ9H3U1 944 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 BLOC1S4Q9NUP1 217 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 EXOC1Q9NV70 894 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
SNRNP35-202ENST00000412157 ZNF236Q9UL36 1845 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 EML1O00423 815 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 IKBKBO14920 756 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 FCER1AP12319 257 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 KRT76Q01546 638 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 CNTN2Q02246 1040 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 PDE4DQ08499 809 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 ECM1Q16610 540 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 CATSPER3Q86XQ3 398 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 LRRC15Q8TF66 581 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 INPP4AQ96PE3 977 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 DNM3Q9UQ16 869 aa12.98□□□□□ -0.33
SNRNP35-202ENST00000412157 E9PMD0 336 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 SLC10A3P09131 477 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 PPP1R2P41236 205 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 JAK3P52333 1124 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 MYL5Q02045 173 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 STIM1Q13586 685 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 Q3C1V9 767 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 KCNK18Q7Z418 384 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 FAM133AQ8N9E0 248 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 DYDC2Q96IM9 177 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 ZCCHC17Q9NP64 241 aaKnown RBP12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 MORF4L1Q9UBU8 362 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 SAMM50Q9Y512 469 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
SNRNP35-202ENST00000412157 NFASCO94856 1347 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 SYNRGQ9UMZ2 1314 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 MGAMO43451 1857 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 MYMKA6NI61 221 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 KLRC4O43908 158 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 EIF3JO75822 258 aaKnown RBP12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 RHOBTB3O94955 611 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 EYA4O95677 639 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 KRT18P05783 430 aaKnown RBP12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 BMP6P22004 513 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 ERCC5P28715 1186 aaPredicted RBP12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 SFNP31947 248 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 SOX10P56693 466 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 ITGB3BPQ13352 177 aaPredicted RBP12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 CTTNQ14247 550 aaKnown RBP12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 CNNM4Q6P4Q7 775 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 B3GNT9Q6UX72 402 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 UNC13DQ70J99 1090 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 TPH2Q8IWU9 490 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 RDM1Q8NG50 284 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 EFCC1Q9HA90 598 aa12.96□□□□□ -0.33
SNRNP35-202ENST00000412157 SOWAHBA6NEL2 793 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 WDR64B1ANS9 1081 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 DHX15O43143 795 aaKnown RBP12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 IDEP14735 1019 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 EDNRBP24530 442 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 ICAM3P32942 547 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 FAM110CQ1W6H9 321 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 KLHL10Q6JEL2 608 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 ZNF746Q6NUN9 644 aaPredicted RBP12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 DYMQ7RTS9 669 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 CCDC65Q8IXS2 484 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 SYT2Q8N9I0 419 aaPredicted RBP12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 DDX12PQ92771 950 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 CCDC102AQ96A19 550 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 NACC1Q96RE7 527 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 LXNQ9BS40 222 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 RGL1Q9NZL6 768 aa12.95□□□□□ -0.34
SNRNP35-202ENST00000412157 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
SNRNP35-202ENST00000412157 SPATA31C2B4DYI2 1134 aa12.94□□□□□ -0.34
SNRNP35-202ENST00000412157 DKC1O60832 514 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRNP35-202ENST00000412157 ADCY5O95622 1261 aa12.94□□□□□ -0.34
SNRNP35-202ENST00000412157 PGK2P07205 417 aa12.94□□□□□ -0.34
SNRNP35-202ENST00000412157 P4HBP07237 508 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms