RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 BPIP17213 487 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 PRKCAP17252 672 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 IL2P60568 153 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 LACTBP83111 547 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 DSG1Q02413 1049 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 MVKQ03426 396 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 STAT4Q14765 748 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GPR19Q15760 415 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 SKOR2Q2VWA4 1001 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 OTOP3Q7RTS5 596 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 NECAB2Q7Z6G3 386 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 ZBTB46Q86UZ6 589 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 CABP7Q86V35 215 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 TCEAL8Q8IYN2 117 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 LILRA2Q8N149 483 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 NXPE1Q8N323 547 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 PLCD4Q9BRC7 762 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 YIPF4Q9BSR8 244 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 RTFDC1Q9BY42 306 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GOLGA6AQ9NYA3 693 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 APOBEC2Q9Y235 224 aaKnown RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 E2F8A0AVK6 867 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 PTPDC1A2A3K4 754 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 NOTOA8MTQ0 251 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 KRIT1O00522 736 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GPR39O43194 453 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 PRPF3O43395 683 aaKnown RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 MSL3P1P0C860 447 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 PDE6AP16499 860 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 TACR1P25103 407 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 CYP4F8P98187 520 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 OCRLQ01968 901 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 FOXD4Q12950 439 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 SNX17Q15036 470 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 FAM102BQ5T8I3 360 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 CLEC4GQ6UXB4 293 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 SPATS2Q86XZ4 545 aaKnown RBP5.74□□□□□ -1.49
BRCA1-204ENST00000412061 SMC1BQ8NDV3 1235 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 C19orf73Q9NVV2 129 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 GPR160Q9UJ42 338 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 ZNF180Q9UJW8 692 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 INTUQ9ULD6 942 aa5.74□□□□□ -1.49
BRCA1-204ENST00000412061 SLC12A8A0AV02 714 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 ZNF561-AS1K7EIQ3 104 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 NEMP1O14524 444 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 PSPNO60542 156 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 MAFKO60675 156 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 FKBP9O95302 570 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 RNASE1P07998 156 aaKnown RBP5.73□□□□□ -1.49
BRCA1-204ENST00000412061 COL6A2P12110 1019 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 KRT15P19012 456 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 ADCYAP1R1P41586 468 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 LSSP48449 732 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 ERVFC1P60507 584 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 KIR3DS1Q14943 382 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 CHRNA2Q15822 529 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 GFOD2Q3B7J2 385 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 HABP4Q5JVS0 413 aaKnown RBP5.73□□□□□ -1.49
BRCA1-204ENST00000412061 NXNQ6DKJ4 435 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 ARHGAP36Q6ZRI8 547 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 FKBP9P1Q75LS8 142 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 OTOP1Q7RTM1 612 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 NLRX1Q86UT6 975 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 OSTM1Q86WC4 334 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.73□□□□□ -1.49
BRCA1-204ENST00000412061 MYLIPQ8WY64 445 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 CHMP4CQ96CF2 233 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 GPR101Q96P66 508 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-204ENST00000412061 NAP1L4Q99733 375 aaKnown RBP5.73□□□□□ -1.49
BRCA1-204ENST00000412061 BOCQ9BWV1 1114 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 SP110Q9HB58 689 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 SLC6A20Q9NP91 592 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 MBNL3Q9NUK0 354 aaKnown RBP5.73□□□□□ -1.49
BRCA1-204ENST00000412061 FBLN5Q9UBX5 448 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 ADAMTS6Q9UKP5 1117 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 NUB1Q9Y5A7 615 aa5.73□□□□□ -1.49
BRCA1-204ENST00000412061 NKRFO15226 690 aaKnown RBP eCLIP5.72□□□□□ -1.49
BRCA1-204ENST00000412061 NTRK1P04629 796 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 AMY2AP04746 511 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 PNLIPP16233 465 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 ATP2A2P16615 1042 aaKnown RBP5.72□□□□□ -1.49
BRCA1-204ENST00000412061 AMY2BP19961 511 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 ARL4AP40617 200 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 SLC6A11P48066 632 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 JAM2P57087 298 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 TMPRSS15P98073 1019 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 BICRALQ6AI39 1079 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 HHIPL2Q6UWX4 724 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 C11orf74Q86VG3 221 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 DGKHQ86XP1 1220 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 DCP2Q8IU60 420 aaKnown RBP5.72□□□□□ -1.49
BRCA1-204ENST00000412061 MAGEB6Q8N7X4 407 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 CHTF18Q8WVB6 975 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 TRIM8Q9BZR9 551 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 C19orf44Q9H6X5 657 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 SMURF1Q9HCE7 757 aa5.72□□□□□ -1.49
BRCA1-204ENST00000412061 CRTAC1Q9NQ79 661 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms