RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 PPP4R3CPQ6ZMV5 832 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 SLFN11Q7Z7L1 901 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 CCDC24Q8N4L8 307 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 SEC14L1Q92503 715 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 KAT2BQ92831 832 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
EPHA4-203ENST00000409938 PSMB7Q99436 277 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 LSM14BQ9BX40 385 aaKnown RBP8.62□□□□□ -1.03
EPHA4-203ENST00000409938 DDX25Q9UHL0 483 aaKnown RBP8.62□□□□□ -1.03
EPHA4-203ENST00000409938 TRAF3IP3Q9Y228 551 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 STXBP5LQ9Y2K9 1186 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 FRMPD2Q68DX3 1309 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-203ENST00000409938 HEXIM1O94992 359 aaKnown RBP8.62□□□□□ -1.03
EPHA4-203ENST00000409938 CYP11B2P19099 503 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 ANXA13P27216 316 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 PRKCIP41743 596 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 FNTAP49354 379 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 ADGRF4Q8IZF3 695 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 ACTRT1Q8TDG2 376 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 PACSIN1Q9BY11 444 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 NT5C3AQ9H0P0 336 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 GGA2Q9UJY4 613 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 NFU1Q9UMS0 254 aa8.62□□□□□ -1.03
EPHA4-203ENST00000409938 ANKRD65E5RJM6 399 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 KRT14P02533 472 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 JAM2P57087 298 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 POLR2FP61218 127 aaKnown RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ITGB3BPQ13352 177 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 LRIG3Q6UXM1 1119 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 YTHDF3Q7Z739 585 aaKnown RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 BCAS4Q8TDM0 211 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 TBC1D5Q92609 795 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 CDK5RAP3Q96JB5 506 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 GPR101Q96P66 508 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ISCUQ9H1K1 167 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 VAT1LQ9HCJ6 419 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 EPB41L5Q9HCM4 733 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ANKIB1Q9P2G1 1089 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 AKR1B1P15121 316 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 MATR3P43243 847 aaKnown RBP eCLIP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 USP11P51784 963 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 TRADDQ15628 312 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 BMT2Q1RMZ1 405 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 RASGEF1CQ8N431 466 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 CALR3Q96L12 384 aaKnown RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 SIX2Q9NPC8 291 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 LTBP4Q8N2S1 1624 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 KDM4FA0A1W2PPD8 638 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 TRAF5O00463 557 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 EBAG9O00559 213 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 RAD51CO43502 376 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ZPR1O75312 459 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 FTCDO95954 541 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 PLA2G4BP0C869 781 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 GUCY2DQ02846 1103 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 UAP1Q16222 522 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 UBE2SQ16763 222 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ICE2Q659A1 982 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 MOXD1Q6UVY6 613 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 ZNF571Q7Z3V5 609 aaPredicted RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 FRMD5Q7Z6J6 570 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 CCDC43Q96MW1 224 aaKnown RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 NAP1L4Q99733 375 aaKnown RBP8.61□□□□□ -1.03
EPHA4-203ENST00000409938 EPN3Q9H201 632 aa8.61□□□□□ -1.03
EPHA4-203ENST00000409938 A0A0A6YYK5 440 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-203ENST00000409938 ATP2B4P23634 1241 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 LSP1P33241 339 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 PTK2Q05397 1052 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 SPATS2Q86XZ4 545 aaKnown RBP8.6□□□□□ -1.03
EPHA4-203ENST00000409938 SH2D3CQ8N5H7 860 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 ETNPPLQ8TBG4 499 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 RBM46Q8TBY0 533 aaKnown RBP8.6□□□□□ -1.03
EPHA4-203ENST00000409938 BORCS6Q96GS4 357 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 TMBIM4Q9HC24 238 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 DAGLAQ9Y4D2 1042 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.6□□□□□ -1.03
EPHA4-203ENST00000409938 E9PMD0 336 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 GNPATO15228 680 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 CCDC65Q8IXS2 484 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 CNPY4Q8N129 248 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 CUL5Q93034 780 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 GJA10Q969M2 543 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 PBKQ96KB5 322 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 ATP6V1G3Q96LB4 118 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 KRT12Q99456 494 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 TAF1DQ9H5J8 278 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-203ENST00000409938 LUC7LQ9NQ29 371 aaKnown RBP8.6□□□□□ -1.03
EPHA4-203ENST00000409938 ANKRD31Q8N7Z5 1873 aa8.6□□□□□ -1.03
EPHA4-203ENST00000409938 NPHP3-ACAD11A0A0J9YXS1 232 aa8.59□□□□□ -1.03
EPHA4-203ENST00000409938 ESYT3A0FGR9 886 aa8.59□□□□□ -1.03
EPHA4-203ENST00000409938 HMGB1P1B2RPK0 211 aaPredicted RBP8.59□□□□□ -1.03
EPHA4-203ENST00000409938 ZBTB5O15062 677 aa8.59□□□□□ -1.03
EPHA4-203ENST00000409938 MED24O75448 989 aa8.59□□□□□ -1.03
EPHA4-203ENST00000409938 FSBPO95073 299 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms