RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
CCDC148-203ENST00000409889 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
CCDC148-203ENST00000409889 NAALADL2Q58DX5 795 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 KLHL23Q8NBE8 558 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 POF1BQ8WVV4 589 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 MAF1Q9H063 256 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
CCDC148-203ENST00000409889 PCDHGC5Q9Y5F6 944 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 MRPL42Q9Y6G3 142 aaKnown RBP12.35□□□□□ -0.43
CCDC148-203ENST00000409889 ABCB11O95342 1321 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 ORC4O43929 436 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 DGKIO75912 1065 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 LGALS2P05162 132 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 NR3C2P08235 984 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 GHRP10912 638 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 FAM26DQ5JW98 314 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 CELF3Q5SZQ8 465 aaKnown RBP12.34□□□□□ -0.43
CCDC148-203ENST00000409889 DGLUCYQ7Z3D6 616 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 RMDN1Q96DB5 314 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 CPVLQ9H3G5 476 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 TLE6Q9H808 572 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 PXMP2Q9NR77 195 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
CCDC148-203ENST00000409889 TPRP12270 2363 aaKnown RBP12.33□□□□□ -0.44
CCDC148-203ENST00000409889 ENPP3O14638 875 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 FOXP2O15409 715 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 GOLGA8HP0CJ92 632 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 SNHG28P0DPA3 235 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 GNAT1P11488 350 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 UBA1P22314 1058 aaKnown RBP12.33□□□□□ -0.44
CCDC148-203ENST00000409889 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
CCDC148-203ENST00000409889 RRP12Q5JTH9 1297 aaKnown RBP12.33□□□□□ -0.44
CCDC148-203ENST00000409889 KCNV1Q6PIU1 500 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 MCF2L2Q86YR7 1114 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 CMTR2Q8IYT2 770 aaKnown RBP12.33□□□□□ -0.44
CCDC148-203ENST00000409889 VN1R2Q8NFZ6 395 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 GPATCH3Q96I76 525 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 NEK1Q96PY6 1258 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 SORCS3Q9UPU3 1222 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 CFAP47Q6ZTR5 3102 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 LOXHD1Q8IVV2 1947 aa12.33□□□□□ -0.44
CCDC148-203ENST00000409889 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 PER2O15055 1255 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 BRD1O95696 1058 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 CHRNA1P02708 482 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 MYCLP12524 364 aaPredicted RBP12.32□□□□□ -0.44
CCDC148-203ENST00000409889 SP2Q02086 613 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 LPIN1Q14693 890 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
CCDC148-203ENST00000409889 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
CCDC148-203ENST00000409889 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
CCDC148-203ENST00000409889 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 EHMT1Q9H9B1 1298 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 MLXIPQ9HAP2 919 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 ANAPC4Q9UJX5 808 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 CEP250Q9BV73 2442 aa12.32□□□□□ -0.44
CCDC148-203ENST00000409889 FNDC1Q4ZHG4 1894 aaPredicted RBP12.31□□□□□ -0.44
CCDC148-203ENST00000409889 ACACBO00763 2458 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 PPFIA3O75145 1194 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 CFBP00751 764 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 FGRP09769 529 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
CCDC148-203ENST00000409889 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 ZMYM1Q5SVZ6 1142 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 LMBR1Q8WVP7 490 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 MFSD1Q9H3U5 465 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 TSHZ2Q9NRE2 1034 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 NR2E1Q9Y466 385 aa12.31□□□□□ -0.44
CCDC148-203ENST00000409889 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
CCDC148-203ENST00000409889 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
CCDC148-203ENST00000409889 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 ADAM17P78536 824 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 MGAT3Q09327 533 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 DUSP6Q16828 381 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
CCDC148-203ENST00000409889 CDCA3Q99618 268 aaPredicted RBP12.3□□□□□ -0.44
CCDC148-203ENST00000409889 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 APOL5Q9BWW9 433 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 S1PR5Q9H228 398 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 MRPL11Q9Y3B7 192 aaKnown RBP12.3□□□□□ -0.44
CCDC148-203ENST00000409889 CACNA1GO43497 2377 aa12.3□□□□□ -0.44
CCDC148-203ENST00000409889 TGFB3P10600 412 aa12.29□□□□□ -0.44
CCDC148-203ENST00000409889 TECP42680 631 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms