RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 TBC1D22BQ9NU19 505 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 RMND1Q9NWS8 449 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 DNM3Q9UQ16 869 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 MAPK8IP1Q9UQF2 711 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 GDAQ9Y2T3 454 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 STK24Q9Y6E0 443 aa13.92□□□□□ -0.18
CHMP3-204ENST00000409727 NPHP3-ACAD11A0A0J9YXS1 232 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 ZBTB39O15060 712 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 KLRC4O43908 158 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
CHMP3-204ENST00000409727 MYL1P05976 194 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 IDEP14735 1019 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
CHMP3-204ENST00000409727 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 TRMT44Q8IYL2 757 aaKnown RBP13.91□□□□□ -0.18
CHMP3-204ENST00000409727 MLKLQ8NB16 471 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 SHCBP1Q8NEM2 672 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 HPS3Q969F9 1004 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 WRAP73Q9P2S5 460 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-204ENST00000409727 TMEM88BA6NKF7 163 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 AP5Z1O43299 807 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 COBLO75128 1261 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 STAM2O75886 525 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 EPHA7Q15375 998 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 TAF1CQ15572 869 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-204ENST00000409727 B3GNT9Q6UX72 402 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 BPIFA3Q9BQP9 254 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 LXNQ9BS40 222 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 BHMT2Q9H2M3 363 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 EXOC1Q9NV70 894 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 MORF4L1Q9UBU8 362 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 DACH1Q9UI36 760 aa13.91□□□□□ -0.18
CHMP3-204ENST00000409727 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 FAM155AB1AL88 458 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-204ENST00000409727 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 SLC26A4O43511 780 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 CCNE2O96020 404 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
CHMP3-204ENST00000409727 KCNA2P16389 499 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 ADORA2AP29274 412 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 STX17P56962 302 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 ZNF658Q5TYW1 1059 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-204ENST00000409727 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
CHMP3-204ENST00000409727 FGD4Q96M96 766 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 TELO2Q9Y4R8 837 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
CHMP3-204ENST00000409727 KIAA1217Q5T5P2 1943 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 MAFGO15525 162 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 TOMM70O94826 608 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 EDNRBP24530 442 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 SLC12A3P55017 1021 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 SP2Q02086 613 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 HSP90AA4PQ58FG1 418 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 CCDC102AQ96A19 550 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 ZIC5Q96T25 663 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 ZHX3Q9H4I2 956 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 JPH1Q9HDC5 661 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-204ENST00000409727 CTNND2Q9UQB3 1225 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 RHOBTB3O94955 611 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 ADCY5O95622 1261 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 CYP11B2P19099 503 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 KRT76Q01546 638 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 MYL5Q02045 173 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 KCNB1Q14721 858 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 CYP4F22Q6NT55 531 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 GPR142Q7Z601 462 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
CHMP3-204ENST00000409727 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
CHMP3-204ENST00000409727 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-204ENST00000409727 DOCK5Q9H7D0 1870 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 B4DLN1 442 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 EYA4O95677 639 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
CHMP3-204ENST00000409727 PRCPP42785 496 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 NCAPHQ15003 741 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 UGCGQ16739 394 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 UNC13DQ70J99 1090 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHMP3-204ENST00000409727 FBXO16Q8IX29 292 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-204ENST00000409727 SYT2Q8N9I0 419 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-204ENST00000409727 SLC39A2Q9NP94 309 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 SLC9A2Q9UBY0 812 aa13.88□□□□□ -0.19
CHMP3-204ENST00000409727 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 JAK3P52333 1124 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 STK4Q13043 487 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 ZNF746Q6NUN9 644 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-204ENST00000409727 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 DNAJC19Q96DA6 116 aa13.87□□□□□ -0.19
CHMP3-204ENST00000409727 NACC1Q96RE7 527 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms