RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 KCNK3O14649 394 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 PLD2O14939 933 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 KCNC1P48547 511 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 SARSP49591 514 aaKnown RBP6.13□□□□□ -1.43
PMS1-203ENST00000409593 VASNQ6EMK4 673 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 OSTM1Q86WC4 334 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 ZDHHC14Q8IZN3 488 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 SCLYQ96I15 445 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 CLIC6Q96NY7 704 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 LUC7LQ9NQ29 371 aaKnown RBP6.13□□□□□ -1.43
PMS1-203ENST00000409593 RIC8BQ9NVN3 520 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 CROTQ9UKG9 612 aa6.13□□□□□ -1.43
PMS1-203ENST00000409593 FAHP16930 419 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 JAM2P57087 298 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 PRAMEF18Q5VWM3 479 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 NLGN4XQ8N0W4 816 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 TMEM209Q96SK2 561 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 TMEM260Q9NX78 707 aa6.12□□□□□ -1.43
PMS1-203ENST00000409593 TCRBV16S1A1N1A0A5B0 115 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 PPP1R12AO14974 1030 aaPredicted RBP6.11□□□□□ -1.43
PMS1-203ENST00000409593 ASMTLO95671 621 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 AMY2AP04746 511 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 AMY2BP19961 511 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 FIGNQ5HY92 759 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 PHF19Q5T6S3 580 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 BTBD8Q5XKL5 378 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 WASF3Q9UPY6 502 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 ATP23Q9Y6H3 246 aa6.11□□□□□ -1.43
PMS1-203ENST00000409593 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 MAN2B1O00754 1011 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 PTPN1P18031 435 aaKnown RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 RPL13P26373 211 aaKnown RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 EPHA5P54756 1037 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 NT5DC1Q5TFE4 455 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 RNPC3Q96LT9 517 aaKnown RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 CLUHP3Q96NS8 147 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 CELF4Q9BZC1 486 aaKnown RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 DDX3XO00571 662 aaKnown RBP eCLIP6.1□□□□□ -1.43
PMS1-203ENST00000409593 KCNQ2O43526 872 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 CKMP06732 381 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 HOXA5P20719 270 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 FNDC3BQ53EP0 1204 aaKnown RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 CD276Q5ZPR3 534 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 TTLL10Q6ZVT0 673 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 IGSF22Q8N9C0 903 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 ADAMTS17Q8TE56 1095 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 WRNIP1Q96S55 665 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 SMURF1Q9HCE7 757 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 DLL4Q9NR61 685 aa6.1□□□□□ -1.43
PMS1-203ENST00000409593 MRPL42Q9Y6G3 142 aaKnown RBP6.1□□□□□ -1.43
PMS1-203ENST00000409593 PRAMEF25A6NGN4 478 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 ACOT7O00154 380 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 OPA1O60313 960 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 GJA9P57773 515 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 SKIDA1Q1XH10 827 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 CPZQ66K79 652 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 MCTP2Q6DN12 878 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 ABHD17CQ6PCB6 329 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 PROSER1Q86XN7 944 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 HOMER1Q86YM7 354 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 L2HGDHQ9H9P8 463 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 FANCLQ9NW38 375 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
PMS1-203ENST00000409593 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.08□□□□□ -1.44
PMS1-203ENST00000409593 FAM90A27PA6NNH2 459 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 SCDO00767 359 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 CYP7B1O75881 506 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 ENO2P09104 434 aaPredicted RBP6.08□□□□□ -1.44
PMS1-203ENST00000409593 IGFALSP35858 605 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 GLRBP48167 497 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 RTP5Q14D33 572 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 RGL3Q3MIN7 710 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 PRR31Q5SQ13 230 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 TRMT10BQ6PF06 316 aaKnown RBP6.08□□□□□ -1.44
PMS1-203ENST00000409593 JAZF1Q86VZ6 243 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 ZNF761Q86XN6 746 aaPredicted RBP6.08□□□□□ -1.44
PMS1-203ENST00000409593 APPBP2Q92624 585 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 ADAM7Q9H2U9 754 aa6.08□□□□□ -1.44
PMS1-203ENST00000409593 A0A0G2JLL6 359 aaPredicted RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 FBXO21O94952 628 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 CYP1A1P04798 512 aaPredicted RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 ZNF28P17035 718 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 GJA4P35212 333 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 CTSWP56202 376 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 LACTBP83111 547 aaPredicted RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 PFKPQ01813 784 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 ZNF460Q14592 562 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 TCEA2Q15560 299 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 TMEM177Q53S58 311 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 DDX53Q86TM3 631 aaKnown RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 C2orf69Q8N8R5 385 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 DTX3Q8N9I9 347 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 PDGFDQ9GZP0 370 aaPredicted RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 SLC39A2Q9NP94 309 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 ARHGAP20Q9P2F6 1191 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 ARHGAP28Q9P2N2 729 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms