RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SP4Q02446 784 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 FUT2Q10981 343 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 PPFIA1Q13136 1202 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 GRIN2CQ14957 1233 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 TRIM71Q2Q1W2 868 aaKnown RBP10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 RUFY3Q7L099 469 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 PPP1R13LQ8WUF5 828 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 DHX38Q92620 1227 aaKnown RBP10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 APBB2Q92870 758 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 ZBED2Q9BTP6 218 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 C22orf23Q9BZE7 217 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 NKX2-4Q9H2Z4 354 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 KCNH7Q9NS40 1196 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 SLC9A2Q9UBY0 812 aa10.36□□□□□ -0.75
SNORD88A-201ENST00000408314 SCN5AQ14524 2016 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 RRN3P2A6NIE6 340 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 GTPBP6O43824 516 aaPredicted RBP10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 TLL1O43897 1013 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 CDKL5O76039 1030 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 AMHP03971 560 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 IFNAR1P17181 557 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 EVCP57679 992 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 WDR5P61964 334 aaKnown RBP10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 ARHGAP4P98171 946 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 ZNF618Q5T7W0 954 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 FAM160B1Q5W0V3 765 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 FAM43BQ6ZT52 329 aaPredicted RBP10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 SEPT8Q92599 483 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 ZMYND12Q9H0C1 365 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 RNPEPQ9H4A4 650 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
SNORD88A-201ENST00000408314 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 M0QZ92 97 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 NBNO60934 754 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 CYP3A4P08684 503 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 CPA1P15085 419 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 TYW1BQ6NUM6 668 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 PLPPR4Q7Z2D5 763 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 RPAINQ86UA6 219 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 TRIM50Q86XT4 487 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 VWCEQ96DN2 955 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 PRDM12Q9H4Q4 367 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 SH3GLB2Q9NR46 395 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 TBC1D22BQ9NU19 505 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 SETD4Q9NVD3 440 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 TUBE1Q9UJT0 475 aa10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
SNORD88A-201ENST00000408314 KAT6AQ92794 2004 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 GSTTP1A0A1W2PQM5 241 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 MEIS1O00470 390 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 TREHO43280 583 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 ATP9AO75110 1047 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 DEXIO95424 95 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 CA3P07451 260 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 XBP1P17861 261 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 PDIA3P30101 505 aaKnown RBP10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 RABGGTBP53611 331 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 ANAPC15P60006 121 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 ZNF200P98182 395 aaPredicted RBP10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 SSRP1Q08945 709 aaKnown RBP10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 ANKRD1Q15327 319 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 GRIK4Q16099 956 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 GALNT17Q6IS24 598 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 MIS18BP1Q6P0N0 1132 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 SYMPKQ92797 1274 aaKnown RBP10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 RAD9AQ99638 391 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 SLC26A6Q9BXS9 759 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 AGO4Q9HCK5 861 aaKnown RBP10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 TRPC6Q9Y210 931 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 GBF1Q92538 1859 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 COL6A3P12111 3177 aa10.33□□□□□ -0.76
SNORD88A-201ENST00000408314 DOCK5Q9H7D0 1870 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 DLL1O00548 723 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 BACH1O14867 736 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 GJB5O95377 273 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 CTSHP09668 335 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 IGFBP4P22692 258 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 STAT5BP51692 787 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 NLRP5P59047 1200 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 ACTR2P61160 394 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 ADAM17P78536 824 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 KRT76Q01546 638 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 PLEKHG4Q58EX7 1191 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 FAM26DQ5JW98 314 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 IER5Q5VY09 327 aa10.32□□□□□ -0.76
SNORD88A-201ENST00000408314 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms