RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 AGXT2Q9BYV1 514 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 EHMT1Q9H9B1 1298 aa22.07■■□□□ 1.12
SMARCB1-204ENST00000407422 CCDC196A0A1B0GTZ2 297 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 CA3P07451 260 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 WDR5P61964 334 aaKnown RBP22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 PFKFB3Q16875 520 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 CNKSR3Q6P9H4 555 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 GAS2L1Q99501 681 aaPredicted RBP22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 MXRA8Q9BRK3 442 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 KCNH7Q9NS40 1196 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 XIRP2A4UGR9 3374 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 ADAMTS3O15072 1205 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 PPFIA3O75145 1194 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 PSMA5P28066 241 aa22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 CLK2P49760 499 aaKnown RBP22.06■■□□□ 1.12
SMARCB1-204ENST00000407422 NID2Q14112 1375 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 RSPH10B2B2RC85 870 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 MAFGO15525 162 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 FOSP01100 380 aaPredicted RBP22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 RSPH10BP0C881 870 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 SCG2P13521 617 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 KCNJ6P48051 423 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 ADAM17P78536 824 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 DEFB103AP81534 67 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 PKN1Q16512 942 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 LMBR1Q8WVP7 490 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 SEPT1Q8WYJ6 367 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 PHKBQ93100 1093 aa22.05■■□□□ 1.12
SMARCB1-204ENST00000407422 ARHGEF15O94989 841 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 ARP10275 920 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 MARK3P27448 753 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 ARHGAP4P98171 946 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 JAKMIP3Q5VZ66 844 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 TEX2Q8IWB9 1127 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 OSBPL7Q9BZF2 842 aa22.04■■□□□ 1.12
SMARCB1-204ENST00000407422 CTSHP09668 335 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 GNAT1P11488 350 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 SREBF1P36956 1147 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 AP3B2Q13367 1082 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 NTRK3Q16288 839 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 CEP55Q53EZ4 464 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 PPM1EQ8WY54 764 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 CERS4Q9HA82 394 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 JPH1Q9HDC5 661 aaPredicted RBP22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 MICAL3Q7RTP6 2002 aa22.03■■□□□ 1.12
SMARCB1-204ENST00000407422 PRPF3O43395 683 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 LGR5O75473 907 aa22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 IGFBP4P22692 258 aa22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 PDIA3P30101 505 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 CCT2P78371 535 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 RUFY3Q7L099 469 aa22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 GLT8D2Q9H1C3 349 aa22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 NCOA5Q9HCD5 579 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 ZSWIM6Q9HCJ5 1215 aa22.02■■□□□ 1.12
SMARCB1-204ENST00000407422 ABHD14A-ACY1A0A1B0GW23 586 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 EVCP57679 992 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 ITGB3BPQ13352 177 aaPredicted RBP22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 TOB2Q14106 344 aaPredicted RBP22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 IKBKEQ14164 716 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 DBF4BQ8NFT6 615 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 GLG1Q92896 1179 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 PCYT2Q99447 389 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 ZMYND12Q9H0C1 365 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 AGO4Q9HCK5 861 aaKnown RBP22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 ERAP1Q9NZ08 941 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 SLC9A2Q9UBY0 812 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 EMSYQ7Z589 1322 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 NRCAMQ92823 1304 aa22.02■■□□□ 1.11
SMARCB1-204ENST00000407422 KIF28PB7ZC32 967 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 RFXAPO00287 272 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 MEIS1O00470 390 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 EPB41L2O43491 1005 aaKnown RBP22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 TLL1O43897 1013 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 TAP1Q03518 808 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 SPRED2Q7Z698 418 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 PPP4R2Q9NY27 417 aa22.01■■□□□ 1.11
SMARCB1-204ENST00000407422 PRRC2BQ5JSZ5 2229 aaKnown RBP22■■□□□ 1.11
SMARCB1-204ENST00000407422 ESYT2A0FGR8 921 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 LCHNA4D1U4 455 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 PPFIA1Q13136 1202 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22■■□□□ 1.11
SMARCB1-204ENST00000407422 RUFY4Q6ZNE9 571 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 SDF4Q9BRK5 362 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
SMARCB1-204ENST00000407422 SMARCAD1Q9H4L7 1026 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 PRDM6Q9NQX0 595 aa22■■□□□ 1.11
SMARCB1-204ENST00000407422 NFASCO94856 1347 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 EPOPA6NHQ4 379 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 FAM86B1E9PN63 330 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 FAM86B2P0C5J1 330 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 ZNF76P36508 570 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 ACTR2P61160 394 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 CCDC85BQ15834 202 aaPredicted RBP21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 PLEKHG4Q58EX7 1191 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 CRYGNQ8WXF5 182 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 ZBED2Q9BTP6 218 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 COL25A1Q9BXS0 654 aaPredicted RBP21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 SLC26A6Q9BXS9 759 aa21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 UPF3BQ9BZI7 483 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-204ENST00000407422 CYP46A1Q9Y6A2 500 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms