RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 RAD54LQ92698 747 aa16.52■□□□□ 0.24
ATG4B-206ENST00000405546 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-206ENST00000405546 SHOX2O60902 331 aaPredicted RBP16.52■□□□□ 0.23
ATG4B-206ENST00000405546 IL1R1P14778 569 aa16.52■□□□□ 0.23
ATG4B-206ENST00000405546 NF2P35240 595 aa16.52■□□□□ 0.23
ATG4B-206ENST00000405546 CARSP49589 748 aaKnown RBP16.52■□□□□ 0.23
ATG4B-206ENST00000405546 MMP14P50281 582 aa16.52■□□□□ 0.23
ATG4B-206ENST00000405546 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.23
ATG4B-206ENST00000405546 ODF2LQ9ULJ1 636 aa16.52■□□□□ 0.23
ATG4B-206ENST00000405546 PCDHA13Q9Y5I0 950 aa16.52■□□□□ 0.23
ATG4B-206ENST00000405546 OPLAHO14841 1288 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 MAN2A1Q16706 1144 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 MIIPQ5JXC2 388 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-206ENST00000405546 ARAP2Q8WZ64 1704 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 PSMD14O00487 310 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-206ENST00000405546 CKAP4Q07065 602 aaKnown RBP16.51■□□□□ 0.23
ATG4B-206ENST00000405546 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 ECM1Q16610 540 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 NAA35Q5VZE5 725 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 TEKT1Q969V4 418 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 PACSIN2Q9UNF0 486 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-206ENST00000405546 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 PABPC4Q13310 644 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATG4B-206ENST00000405546 CNPY4Q8N129 248 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-206ENST00000405546 STK17AQ9UEE5 414 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
ATG4B-206ENST00000405546 LSP1P33241 339 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 GUCY2DQ02846 1103 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CEP85LQ5SZL2 805 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
ATG4B-206ENST00000405546 SPATA4Q8NEY3 305 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 ALS2CR12Q96Q35 445 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
ATG4B-206ENST00000405546 ARHGAP20Q9P2F6 1191 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATG4B-206ENST00000405546 MCM3P25205 808 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 VAV2P52735 878 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 DDR1Q08345 913 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CFAP58Q5T655 872 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CENPPQ6IPU0 288 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CCDC170Q8IYT3 715 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 AENQ8WTP8 325 aaKnown RBP16.5■□□□□ 0.23
ATG4B-206ENST00000405546 MTMR9Q96QG7 549 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 KLC4Q9NSK0 619 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 IRS2Q9Y4H2 1338 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 TUBBP07437 444 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 TMOD1P28289 359 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 PPP1R2P41236 205 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 PAFAH1B1P43034 410 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CDR1P51861 262 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 COASYQ13057 564 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 DCAF17Q5H9S7 520 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-206ENST00000405546 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CDC42EP5Q6NZY7 148 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 SLC30A10Q6XR72 485 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 EPB41L5Q9HCM4 733 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 RBM12Q9NTZ6 932 aaKnown RBP16.5■□□□□ 0.23
ATG4B-206ENST00000405546 HAUS2Q9NVX0 235 aa16.5■□□□□ 0.23
ATG4B-206ENST00000405546 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 ZBTB5O15062 677 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 POTEIP0CG38 1075 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 HOXA13P31271 388 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 NAA25Q14CX7 972 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 QRICH1Q2TAL8 776 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 C8orf74Q6P047 294 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 POTEGQ6S5H5 508 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 ZNF473Q8WTR7 871 aaKnown RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 LRRC27Q9C0I9 530 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 PHLPP1O60346 1717 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 GOLGA6L7A0A1B0GV03 622 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 OPA1O60313 960 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 EEF2P13639 858 aaKnown RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 FNTAP49354 379 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 FKBP3Q00688 224 aaKnown RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 ADAM9Q13443 819 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 CHADLQ6NUI6 762 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 CCDC13Q8IYE1 715 aa16.49■□□□□ 0.23
ATG4B-206ENST00000405546 GUF1Q8N442 669 aaKnown RBP16.49■□□□□ 0.23
ATG4B-206ENST00000405546 PVALEFA0A1B0GWK0 134 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 SFI1A8K8P3 1242 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 ZNF263O14978 683 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 CHMP2AO43633 222 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 ELF1P32519 619 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 MSL3Q8N5Y2 521 aaKnown RBP16.48■□□□□ 0.23
ATG4B-206ENST00000405546 FGFBP2Q9BYJ0 223 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 CLGNO14967 610 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 HLTFQ14527 1009 aaKnown RBP eCLIP16.48■□□□□ 0.23
ATG4B-206ENST00000405546 SEPT2Q15019 361 aa16.48■□□□□ 0.23
ATG4B-206ENST00000405546 PAPD7Q5XG87 772 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms