RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 RNF180Q86T96 592 aa12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 RAB3IL1Q8TBN0 382 aa12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 ATP6V0A4Q9HBG4 840 aa12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 PPP2R2CQ9Y2T4 447 aa12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 RPN1P04843 607 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 PLEKHA4Q9H4M7 779 aa12.81□□□□□ -0.36
RAPGEF3-204ENST00000405493 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 SNAP23O00161 211 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 HOXA13P31271 388 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 BBS5Q8N3I7 341 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 U2AF1L4Q8WU68 220 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 SPATA33Q96N06 139 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 GCOM2Q9BZD3 368 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 PPARDQ03181 441 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 OR6J1Q8NGC5 347 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 GSDMBQ8TAX9 411 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 ZNF302Q9NR11 478 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 ASIC3Q9UHC3 531 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 K7ERI5 159 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 SETDB1Q15047 1291 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 MAIP1Q8WWC4 291 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 SLC8A2Q9UPR5 921 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 KRT10P13645 584 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 STAT1P42224 750 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 WHAMMP3Q1A5X7 153 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 VCPKMTQ9H867 229 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 VWDEQ8N2E2 1590 aa12.8□□□□□ -0.36
RAPGEF3-204ENST00000405493 COBLO75128 1261 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 TFRCP02786 760 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 DLATP10515 647 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PSMC4P43686 418 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 KYAT1Q16773 422 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 CFAP221Q4G0U5 840 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PSPC1Q8WXF1 523 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 DPF2Q92785 391 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 FLT1P17948 1338 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 NAA25Q14CX7 972 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 RPGRIP1Q96KN7 1286 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 TSKSQ9UJT2 592 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 BCORL1Q5H9F3 1711 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 ALDH3A1P30838 453 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 INHBEP58166 350 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 DSTYKQ6XUX3 929 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PPP1R13BQ96KQ4 1090 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 SPTLC3Q9NUV7 552 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 GH1P01241 217 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 MMP1P03956 469 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 MAPK4P31152 587 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 LDHDQ86WU2 507 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 RABGGTAQ92696 567 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 CCDC51Q96ER9 411 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PARVGQ9HBI0 331 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 PRELPP51888 382 aa12.79□□□□□ -0.36
RAPGEF3-204ENST00000405493 TXNP10599 105 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 CYP2B6P20813 491 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 ADAM9Q13443 819 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 NT5C1BQ96P26 610 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 BCL9O00512 1426 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 RPLP2P05387 115 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 AKR1B1P15121 316 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 UBE2SQ16763 222 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 MAP7D1Q3KQU3 841 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 TWF2Q6IBS0 349 aaKnown RBP12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 XRRA1Q6P2D8 792 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 CCDC105Q8IYK2 499 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 PI4K2BQ8TCG2 481 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 NLRP4Q96MN2 994 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 RABEP2Q9H5N1 569 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 RIC8AQ9NPQ8 531 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 GPR75-ASB3A0A0A6YYF3 556 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 PPP6R2O75170 966 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 MARK3P27448 753 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 GABPAQ06546 454 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 CUL4BQ13620 913 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms