RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 CTAGE15A4D2H0 777 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 POTECB2RU33 542 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 PSMD14O00487 310 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 CETN3O15182 167 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 CALUO43852 315 aaPredicted RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 TBCAO75347 108 aaKnown RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 MED24O75448 989 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 CTAGE8P0CG41 777 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 SLURP2P0DP57 97 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 GAP43P17677 238 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 MUTP22033 750 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 EPS15P42566 896 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 SLC12A3P55017 1021 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 CKAP4Q07065 602 aaKnown RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 KIF5AQ12840 1032 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 BRD3Q15059 726 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 LRRC41Q15345 812 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 EZH2Q15910 746 aaKnown RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 SHROOM1Q2M3G4 852 aaPredicted RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 ZCWPW2Q504Y3 356 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 POTEBQ6S5H4 581 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 CACNA2D4Q7Z3S7 1137 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 CTAGE6Q86UF2 777 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 CTAGE4Q8IX94 777 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 PLPP6Q8IY26 295 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 NIM1KQ8IY84 436 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 UBE2Q2Q8WVN8 375 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 RPGRIP1Q96KN7 1286 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 GMLQ99445 158 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 IRX2Q9BZI1 471 aaPredicted RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 DEF6Q9H4E7 631 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 VCPKMTQ9H867 229 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 MMRN2Q9H8L6 949 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 TUFT1Q9NNX1 390 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 AGPAT5Q9NUQ2 364 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 FEM1BQ9UK73 627 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 ZBTB21Q9ULJ3 1066 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 ZNRF3Q9ULT6 936 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 MYO6Q9UM54 1294 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 GUCA1BQ9UMX6 200 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 PLAGL2Q9UPG8 496 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
CBX1-203ENST00000402583 BAZ2BQ9UIF8 2168 aaKnown RBP10.29□□□□□ -0.76
CBX1-203ENST00000402583 SLX4Q8IY92 1834 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 A0A1W2PRG0 241 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 ANO9A1A5B4 782 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 MSH4O15457 936 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 ERLIN1O75477 346 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 RAD17O75943 681 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 EYA4O95677 639 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 RPL13P26373 211 aaKnown RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 STAT3P40763 770 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 VAV2P52735 878 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 SNAP25P60880 206 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 HERVK_113P62684 666 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 GABPB1Q06547 395 aaPredicted RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 SPIRE1Q08AE8 756 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 SF3B2Q13435 895 aaKnown RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 STXBP4Q6ZWJ1 553 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 CATSPER3Q86XQ3 398 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 ZC3H3Q8IXZ2 948 aaKnown RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 LRRN4CLQ8ND94 238 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 SLC16A10Q8TF71 515 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 SYN2Q92777 582 aaPredicted RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 WDR11Q9BZH6 1224 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 GBP3Q9H0R5 595 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 RANBP17Q9H2T7 1088 aaKnown RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 ZHX3Q9H4I2 956 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 VEZTQ9HBM0 779 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 ARFGAP3Q9NP61 516 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 GINM1Q9NU53 330 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 CEP72Q9P209 647 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 REXO2Q9Y3B8 237 aaKnown RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 PCDHA2Q9Y5H9 948 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.28□□□□□ -0.76
CBX1-203ENST00000402583 MYH4Q9Y623 1939 aa10.28□□□□□ -0.76
CBX1-203ENST00000402583 ZNF646O15015 1829 aaPredicted RBP10.28□□□□□ -0.76
CBX1-203ENST00000402583 SSU72P8A0A1W2PR75 194 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 RASSF10A6NK89 507 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 FAM86B1E9PN63 330 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 PDXKO00764 312 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 AKR1B10O60218 316 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 TACC1O75410 805 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 ASNSP08243 561 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 FAM86B2P0C5J1 330 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 MCM3P25205 808 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 HOXA13P31271 388 aaPredicted RBP10.27□□□□□ -0.77
CBX1-203ENST00000402583 KLK7P49862 253 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 FAM193AP78312 1265 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 EN1Q05925 392 aaPredicted RBP10.27□□□□□ -0.77
CBX1-203ENST00000402583 GIT2Q14161 759 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 TNIP1Q15025 636 aa10.27□□□□□ -0.77
CBX1-203ENST00000402583 SLC9C1Q4G0N8 1177 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms