RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 APBA3O96018 575 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 TCP1P17987 556 aaKnown RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 SMARCA1P28370 1054 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 SHMT1P34896 483 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 USP8P40818 1118 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 VPS36Q86VN1 386 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 DNAAF5Q86Y56 855 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 MSANTD4Q8NCY6 345 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 AFAP1L1Q8TED9 768 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 MS4A14Q96JA4 679 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 LRRC1Q9BTT6 524 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 TRPC5Q9UL62 973 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 MYH10P35580 1976 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 LRP5O75197 1615 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 GOLGB1Q14789 3259 aaKnown RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 DDTLA6NHG4 134 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 ACTN1P12814 892 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 XRCC5P13010 732 aaKnown RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 KCNH2Q12809 1159 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 EZH2Q15910 746 aaKnown RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 SFR1Q86XK3 245 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 FAM163AQ96GL9 167 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 CSRNP1Q96S65 589 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 NAP1L4Q99733 375 aaKnown RBP8.46□□□□□ -1.06
HDAC9-201ENST00000401921 RGL1Q9NZL6 768 aa8.46□□□□□ -1.06
HDAC9-201ENST00000401921 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-201ENST00000401921 CEP104O60308 925 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 PPP1R11O60927 126 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-201ENST00000401921 HSF2BPO75031 334 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 GUCY2FP51841 1108 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 CTTNQ14247 550 aaKnown RBP8.45□□□□□ -1.06
HDAC9-201ENST00000401921 CFAP221Q4G0U5 840 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 TTC19Q6DKK2 380 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-201ENST00000401921 SLFN12Q8IYM2 578 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 HAS1Q92839 578 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 OSBPL9Q96SU4 736 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 GLT8D2Q9H1C3 349 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 SNX12Q9UMY4 172 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 BCORQ6W2J9 1755 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 ESYT3A0FGR9 886 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 ANKRD65E5RJM6 399 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 H0YIN7 160 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 MED24O75448 989 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 EPB41P11171 864 aaKnown RBP8.45□□□□□ -1.06
HDAC9-201ENST00000401921 NPR1P16066 1061 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 PDE6BP35913 854 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 MEA1Q16626 185 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 EXOC3L4Q17RC7 722 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 TBC1D10BQ4KMP7 808 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-201ENST00000401921 PDXDC1Q6P996 788 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 FAM71BQ8TC56 605 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 IQCDQ96DY2 449 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 SELENOOQ9BVL4 669 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 FGFBP2Q9BYJ0 223 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 SH2D4AQ9H788 454 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 RAB21Q9UL25 225 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 GAKO14976 1311 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 ROBO3Q96MS0 1386 aa8.45□□□□□ -1.06
HDAC9-201ENST00000401921 CCDC88AQ3V6T2 1871 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ANO9A1A5B4 782 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GOLGA6CA6NDK9 693 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 KCNK3O14649 394 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ZNF263O14978 683 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RGL2O15211 777 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 PALMO75781 387 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GOLGA6DP0CG33 693 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 BMP3P12645 472 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RPL13P26373 211 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CYP2J2P51589 502 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 PSMC6P62333 389 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 AMPD2Q01433 879 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GUCY2DQ02846 1103 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SEMA3FQ13275 785 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ORC2Q13416 577 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 TTC31Q49AM3 519 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 PPP4R3AQ6IN85 833 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 KRT27Q7Z3Y8 459 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 MAATS1Q7Z4T9 603 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 FNBP4Q8N3X1 1017 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SPATA4Q8NEY3 305 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 HNRNPLLQ8WVV9 542 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GOLPH3Q9H4A6 298 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GOLGA6AQ9NYA3 693 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 DMGDHQ9UI17 866 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 RABGAP1Q9Y3P9 1069 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 POLRMTO00411 1230 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CALUO43852 315 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GNA14O95837 355 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 GGCXP38435 758 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 ARHGAP44Q17R89 818 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CRY2Q49AN0 593 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 PAPD7Q5XG87 772 aaKnown RBP8.44□□□□□ -1.06
HDAC9-201ENST00000401921 HS2ST1Q7LGA3 356 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 CPXCR1Q8N123 301 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 FAM76AQ8TAV0 307 aa8.44□□□□□ -1.06
HDAC9-201ENST00000401921 HDAC7Q8WUI4 952 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms