RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 TCF7P36402 384 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-203ENST00000400772 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 TCTN1Q2MV58 587 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 CEP55Q53EZ4 464 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 ATP6V0A1Q93050 837 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-203ENST00000400772 SETD4Q9NVD3 440 aa18.12■□□□□ 0.49
ATG4B-203ENST00000400772 ACTN1P12814 892 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 MYOGP15173 224 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 ATP2A2P16615 1042 aaKnown RBP18.11■□□□□ 0.49
ATG4B-203ENST00000400772 ADAM17P78536 824 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 ARHGAP4P98171 946 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 RAB30Q15771 203 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 ZNF274Q96GC6 653 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-203ENST00000400772 PCYT2Q99447 389 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 NKX2-4Q9H2Z4 354 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 AGO4Q9HCK5 861 aaKnown RBP18.11■□□□□ 0.49
ATG4B-203ENST00000400772 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 MSRAQ9UJ68 235 aa18.11■□□□□ 0.49
ATG4B-203ENST00000400772 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-203ENST00000400772 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
ATG4B-203ENST00000400772 PARNO95453 639 aaKnown RBP18.1■□□□□ 0.49
ATG4B-203ENST00000400772 CYP3A4P08684 503 aa18.1■□□□□ 0.49
ATG4B-203ENST00000400772 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
ATG4B-203ENST00000400772 THPOP40225 353 aa18.1■□□□□ 0.49
ATG4B-203ENST00000400772 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-203ENST00000400772 JPH1Q9HDC5 661 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-203ENST00000400772 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
ATG4B-203ENST00000400772 SLC9A2Q9UBY0 812 aa18.1■□□□□ 0.49
ATG4B-203ENST00000400772 NFASCO94856 1347 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 LGR5O75473 907 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 AKAP17AQ02040 695 aaKnown RBP18.09■□□□□ 0.49
ATG4B-203ENST00000400772 PHOSPHO2Q8TCD6 241 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 CCDC12Q8WUD4 166 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-203ENST00000400772 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 VPS54Q9P1Q0 977 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 PCDHA11Q9Y5I1 949 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 GBF1Q92538 1859 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 EYSQ5T1H1 3165 aa18.09■□□□□ 0.49
ATG4B-203ENST00000400772 IGLV3-22A0A075B6J6 115 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 EDIL3O43854 480 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 BAIAP3O94812 1187 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 GNA11P29992 359 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 CNKSR3Q6P9H4 555 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 NIPA1Q7RTP0 329 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 REXO1Q8N1G1 1221 aaKnown RBP18.08■□□□□ 0.48
ATG4B-203ENST00000400772 SLC17A8Q8NDX2 589 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 RASGRP4Q8TDF6 673 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 SLC9A7Q96T83 725 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 OSBPL7Q9BZF2 842 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.48
ATG4B-203ENST00000400772 EMSYQ7Z589 1322 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 NRCAMQ92823 1304 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 RSPH10B2B2RC85 870 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 DHX15O43143 795 aaKnown RBP18.07■□□□□ 0.48
ATG4B-203ENST00000400772 ATG7O95352 703 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 RSPH10BP0C881 870 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 GNAT1P11488 350 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 FOSL2P15408 326 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 MARK3P27448 753 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 ZNF76P36508 570 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 ACTR2P61160 394 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 WDR5P61964 334 aaKnown RBP18.07■□□□□ 0.48
ATG4B-203ENST00000400772 STK3Q13188 491 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 GLG1Q92896 1179 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 IL17RAQ96F46 866 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 SDF4Q9BRK5 362 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 ERAP1Q9NZ08 941 aa18.07■□□□□ 0.48
ATG4B-203ENST00000400772 CCNE2O96020 404 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 ANAPC15P60006 121 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 SSRP1Q08945 709 aaKnown RBP18.06■□□□□ 0.48
ATG4B-203ENST00000400772 MARCH8Q5T0T0 291 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 MCTP2Q6DN12 878 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 RUFY4Q6ZNE9 571 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 HERC6Q8IVU3 1022 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 CCDC148Q8NFR7 591 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 UIMC1Q96RL1 719 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 PRDM12Q9H4Q4 367 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 SH3GLB2Q9NR46 395 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
ATG4B-203ENST00000400772 IGKV6D-21A0A0A0MT36 114 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 MBLAC1A4D2B0 266 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-203ENST00000400772 CAND2O75155 1236 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 SEC24BO95487 1268 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 CIITAP33076 1130 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 DEFB103AP81534 67 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 SCRN1Q12765 414 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 PPFIA1Q13136 1202 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 MKRN4PQ13434 485 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-203ENST00000400772 GRIK4Q16099 956 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 TMCO2Q7Z6W1 182 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-203ENST00000400772 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-203ENST00000400772 BICD2Q8TD16 824 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 AIFM3Q96NN9 605 aa18.05■□□□□ 0.48
ATG4B-203ENST00000400772 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
ATG4B-203ENST00000400772 DDX39AO00148 427 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms