RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 MAN1B1Q9UKM7 699 aa10.35□□□□□ -0.75
CSMD1-202ENST00000400186 NUP153P49790 1475 aaKnown RBP10.35□□□□□ -0.75
CSMD1-202ENST00000400186 ZNF658Q5TYW1 1059 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-202ENST00000400186 RYBPQ8N488 228 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-202ENST00000400186 FAM193BQ96PV7 902 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-202ENST00000400186 GOLGA8HP0CJ92 632 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 FKBP3Q00688 224 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 YWHAHQ04917 246 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 CENPUQ71F23 418 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PDIK1LQ8N165 341 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 AP1M1Q9BXS5 423 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 TMEM60Q9H2L4 133 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 MAGED2Q9UNF1 606 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 NOVA2Q9UNW9 492 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PRPSAP2O60256 369 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 THOC5Q13769 683 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 SPARCL1Q14515 664 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 FAM47CQ5HY64 1035 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 SUPT20HQ8NEM7 779 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PYROXD1Q8WU10 500 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 RPS6KC1Q96S38 1066 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PPARGC1AQ9UBK2 798 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 GYG2O15488 501 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 DDIT3P35638 169 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PABPC4Q13310 644 aaKnown RBP eCLIP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 NCLNQ969V3 563 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 LSG1Q9H089 658 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PDE6BP35913 854 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PRKG1Q13976 671 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 GLE1Q53GS7 698 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 TRIM67Q6ZTA4 783 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 NDUFA10O95299 355 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 NR1H3Q13133 447 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 GRAMD1CQ8IYS0 662 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 RNF217Q8TC41 542 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 SSH3Q8TE77 659 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 GIPC2Q8TF65 315 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 MID2Q9UJV3 735 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 CAPN11Q9UMQ6 739 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 BCAMP50895 628 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ICE2Q659A1 982 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 FGGP02679 453 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ZBTB41Q5SVQ8 909 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 C1orf146Q5VVC0 180 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 HIPK4Q8NE63 616 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PAGR1Q9BTK6 254 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 UBE2TQ9NPD8 197 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PTPN21Q16825 1174 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 KIF19Q2TAC6 998 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 BBS9Q3SYG4 887 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 TRIML2Q8N7C3 387 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ACCSQ96QU6 501 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 G3BP2Q9UN86 482 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 H0Y3Z8 333 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ARHGEF9O43307 516 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 A1BGP04217 495 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 ARL4AP40617 200 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 TFAMQ00059 246 aaKnown RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 TAF1BQ53T94 588 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-202ENST00000400186 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 SPTLC3Q9NUV7 552 aa10.34□□□□□ -0.75
CSMD1-202ENST00000400186 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
CSMD1-202ENST00000400186 FOSP01100 380 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-202ENST00000400186 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 M0R2C6 588 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 OCA2Q04671 838 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 KIF17Q9P2E2 1029 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 A0A087WWV3 80 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 THAP9Q9H5L6 903 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 SUFUQ9UMX1 484 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 TBC1D1Q86TI0 1168 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ENOX1Q8TC92 643 aaKnown RBP10.33□□□□□ -0.76
CSMD1-202ENST00000400186 FAM149B1Q96BN6 582 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ZFP69BQ9UJL9 534 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 CSADQ9Y600 493 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 SYNGAP1Q96PV0 1343 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ZBED6P86452 979 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ASPRV1Q53RT3 343 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 LAMC1P11047 1609 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 TMPRSS15P98073 1019 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-202ENST00000400186 RMDN2Q96LZ7 410 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ZBTB18Q99592 522 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 TOM1O60784 492 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ZBED1O96006 694 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 PYGLP06737 847 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-202ENST00000400186 PITPNM3Q9BZ71 974 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 PALMDQ9NP74 551 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ATP8B3O60423 1300 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 KDM5CP41229 1560 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ZNF233A6NK53 670 aa10.33□□□□□ -0.76
CSMD1-202ENST00000400186 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms