RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 KCNA1Q09470 495 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 PEX26Q7Z412 305 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 SDCCAG3Q96C92 435 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 IFT122Q9HBG6 1241 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ERBB4Q15303 1308 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 SUPT3HB4E1H0 165 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 NDUFB5O43674 189 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 GNA14O95837 355 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 CCDC13Q8IYE1 715 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ZNF280CQ8ND82 737 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 TEKT2Q9UIF3 430 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ZNF608Q9ULD9 1512 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ZC3H4Q9UPT8 1303 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 KIAA0232Q92628 1395 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 EBAG9O00559 213 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 PHKG2P15735 406 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 STAT1P42224 750 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 CYP27A1Q02318 531 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 CDKL2Q92772 493 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 SARS2Q9NP81 518 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 BABAM1Q9NWV8 329 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 SBNO1A3KN83 1393 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ARHGAP4P98171 946 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 FAM160B2Q86V87 743 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 ZNF668Q96K58 619 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
CACNA1C-216ENST00000399638 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 ARHGAP15Q53QZ3 475 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 TRMT10CQ7L0Y3 403 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 BLIDQ8IZY5 108 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 DHX36Q9H2U1 1008 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 KANSL2Q9H9L4 492 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 RAD18Q9NS91 495 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 NR2E3Q9Y5X4 410 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 FOSP01100 380 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 RAD51Q06609 339 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 AAASQ9NRG9 546 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 NSFP46459 744 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 YWHAHQ04917 246 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 PTK2Q05397 1052 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 MEI1Q5TIA1 1274 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 LRRC31Q6UY01 552 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 SPATA33Q96N06 139 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 FBXO40Q9UH90 709 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 SGK1O00141 431 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 HUS1O60921 280 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 U2AF2P26368 475 aaKnown RBP eCLIP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 ADCY8P40145 1251 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 SNAPC2Q13487 334 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 TRIM48Q8IWZ4 208 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 MYOCDQ8IZQ8 938 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 GIMAP8Q8ND71 665 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 GPT2Q8TD30 523 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 LSM7Q9UK45 103 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 TAF11Q15544 211 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 TDRD3Q9H7E2 651 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 TAB2Q9NYJ8 693 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 RGL1Q9NZL6 768 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 STRIP2Q9ULQ0 834 aa11.82□□□□□ -0.52
CACNA1C-216ENST00000399638 MYO3BQ8WXR4 1341 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 CREB3O43889 395 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 RASGRF1Q13972 1273 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 CDO1Q16878 200 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 PSMB7Q99436 277 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 C2CD2LO14523 706 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 IFNA8P32881 189 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 CRKP46108 304 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 FSCBQ5H9T9 825 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 SLF1Q9BQI6 1058 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 NPHP4O75161 1426 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 CFAP69A5D8W1 941 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 UBXN8O00124 270 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ANKS3Q6ZW76 656 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ADCK2Q7Z695 626 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 TOPORSQ9NS56 1045 aaPredicted RBP11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 DNAJC6O75061 913 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ASNSP08243 561 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 HADHAP40939 763 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 G2E3Q7L622 706 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 RNF10Q8N5U6 811 aaKnown RBP11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ZCWPW1Q9H0M4 648 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 GREM2Q9H772 168 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
CACNA1C-216ENST00000399638 LRG1P02750 347 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms