RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 RAPGEF5Q92565 580 aa12.52□□□□□ -0.41
HLCS-202ENST00000399120 MRPL40Q9NQ50 206 aaKnown RBP12.52□□□□□ -0.41
HLCS-202ENST00000399120 NXF1Q9UBU9 619 aaKnown RBP12.52□□□□□ -0.41
HLCS-202ENST00000399120 A1BGP04217 495 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 PMS1P54277 932 aaKnown RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 SKOR1P84550 965 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 TEDDM1Q5T9Z0 273 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 ZC3H18Q86VM9 953 aaKnown RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 ZSCAN32Q9NX65 697 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 TNKSO95271 1327 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 HOXB7P09629 217 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 HDAC4P56524 1084 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 C10orf76Q5T2E6 689 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 ACAD11Q709F0 780 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 NEK9Q8TD19 979 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 COPG1Q9Y678 874 aaKnown RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 DENND4BO75064 1496 aaPredicted RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 LAD1O00515 517 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 SRGAP2CP0DJJ0 459 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 ATP5JP18859 108 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 CA4P22748 312 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 CIITAP33076 1130 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 LARP4BQ92615 738 aaKnown RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 CCDC159P0C7I6 412 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 RNF219Q5W0B1 726 aaPredicted RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 WDR75Q8IWA0 830 aaKnown RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 ASPSCR1Q9BZE9 553 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 ZMYND12Q9H0C1 365 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 PCDHA1Q9Y5I3 950 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 NPATQ14207 1427 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 CREB3O43889 395 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 OSBPP22059 807 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 NDUFA8P51970 172 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
HLCS-202ENST00000399120 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 RNF14Q9UBS8 474 aa12.51□□□□□ -0.41
HLCS-202ENST00000399120 GFPT2O94808 682 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 EDEM3Q9BZQ6 932 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 CARSP49589 748 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 MECOMQ03112 1051 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 LLGL1Q15334 1064 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 TTC30AQ86WT1 665 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 DYDC2Q96IM9 177 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 KLC2Q9H0B6 622 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 STRIP2Q9ULQ0 834 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 ABCC1P33527 1531 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 MED23Q9ULK4 1368 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 WBP4O75554 376 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 TBC1D10BQ4KMP7 808 aaPredicted RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 RWDD4Q6NW29 188 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 SDR42E1Q8WUS8 393 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 FAF2Q96CS3 445 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 HEXIM2Q96MH2 286 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 PCIF1Q9H4Z3 704 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 PFKFB2O60825 505 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 ZRANB2O95218 330 aaKnown RBP eCLIP12.5□□□□□ -0.41
HLCS-202ENST00000399120 BRD1O95696 1058 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 FTCDO95954 541 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
HLCS-202ENST00000399120 SCNN1DP51172 638 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 RPS8P62241 208 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 ADCY2Q08462 1091 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 TEX9Q8N6V9 391 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 NOP53Q9NZM5 478 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 GYG2O15488 501 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 ZSCAN9O15535 394 aaPredicted RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 STAT2P52630 851 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 CTSWP56202 376 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 TMPRSS15P98073 1019 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 DR1Q01658 176 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 RBL2Q08999 1139 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 GPR162Q16538 588 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 HSPH1Q92598 858 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 P2RX5Q93086 422 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 FMO2Q99518 471 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 PPARGC1AQ9UBK2 798 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 APOBEC2Q9Y235 224 aaKnown RBP12.5□□□□□ -0.41
HLCS-202ENST00000399120 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
HLCS-202ENST00000399120 M0R2C6 588 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 ZNF263O14978 683 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 COBLO75128 1261 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 BTDP43251 543 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 RECQLP46063 649 aaPredicted RBP12.49□□□□□ -0.41
HLCS-202ENST00000399120 ALS2CLQ60I27 953 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 ZBTB33Q86T24 672 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 SCG3Q8WXD2 468 aaKnown RBP12.49□□□□□ -0.41
HLCS-202ENST00000399120 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 PCDHA7Q9UN72 937 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 NR1D1P20393 614 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 CDC25BP30305 580 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms