RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SETSIPP0DME0 302 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 HDLBPQ00341 1268 aaKnown RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 TTLL12Q14166 644 aaPredicted RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 NUGGCQ68CJ6 796 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 THRAP3Q9Y2W1 955 aaKnown RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 H0Y3Z8 333 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 GDF11O95390 407 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 CCNE1P24864 410 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 ALDH1B1P30837 517 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 SEPT14Q6ZU15 432 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 ARL8AQ96BM9 186 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 RNPC3Q96LT9 517 aaKnown RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 RAB21Q9UL25 225 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 FAM196BA6NMK8 535 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 TCP10L2B9ZVM9 353 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 PPIP5K2O43314 1243 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 MYCLP12524 364 aaPredicted RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 UBXN2AP68543 259 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 BIRC3Q13489 604 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 ARHGAP44Q17R89 818 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 LRRC23Q53EV4 343 aaPredicted RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 NAIF1Q69YI7 327 aaPredicted RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 FMO2Q99518 471 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 THAP9Q9H5L6 903 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 PARP2Q9UGN5 583 aa15.88■□□□□ 0.13
RPRD1A-202ENST00000399022 EXOC3O60645 756 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 PALMO75781 387 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 CEP128Q6ZU80 1094 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 CCDC13Q8IYE1 715 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 GJA10Q969M2 543 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 USP17L5A8MUK1 530 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 PPEF1O14829 653 aaPredicted RBP15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 DIAPH2O60879 1101 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 TTLL1O95922 423 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 ADAM9Q13443 819 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 NSMFQ6X4W1 530 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 PSMD1Q99460 953 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 NDST4Q9H3R1 872 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 CD209Q9NNX6 404 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 MEIS1O00470 390 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 CALUO43852 315 aaPredicted RBP15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 BBOX1O75936 387 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 CYP2J2P51589 502 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 SNAP25P60880 206 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 DRP2Q13474 957 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 MAN2A1Q16706 1144 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 FBXO11Q86XK2 927 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 NEK9Q8TD19 979 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 SGSM3Q96HU1 749 aa15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 ARMCX3Q9UH62 379 aaPredicted RBP15.87■□□□□ 0.13
RPRD1A-202ENST00000399022 NTSR2O95665 410 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 BAG2O95816 211 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 PHLDB3Q6NSJ2 640 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 JDP2Q8WYK2 163 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 OVOS2A0A0G2JMS6 1433 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 OPHN1O60890 802 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 PFDN1O60925 122 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 CUL1Q13616 776 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 PPP2R5EQ16537 467 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 CEP95Q96GE4 821 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 AK8Q96MA6 479 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 SCOCQ9UIL1 159 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 GGT7Q9UJ14 662 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 PACSIN2Q9UNF0 486 aaPredicted RBP15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 POTEMA6NI47 508 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 LAD1O00515 517 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 TMOD1P28289 359 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 STAT1P42224 750 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 ASPRV1Q53RT3 343 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 CYB5D1Q6P9G0 228 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 ZNF512BQ96KM6 892 aaPredicted RBP15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 GAS7O60861 476 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 HARSP12081 509 aaKnown RBP15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 KLRK1P26718 216 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 LLGL1Q15334 1064 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 OTUD6AQ7L8S5 288 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 ARHGAP24Q8N264 748 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 CYFIP2Q96F07 1278 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 CHMP6Q96FZ7 201 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 TMEM260Q9NX78 707 aa15.86■□□□□ 0.13
RPRD1A-202ENST00000399022 CLRN2A0PK11 232 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 EVI5O60447 810 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 SKAP2O75563 359 aaPredicted RBP15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 CARSP49589 748 aaKnown RBP15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 DLGAP5Q15398 846 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 MS4A14Q96JA4 679 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 KCND1Q9NSA2 647 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 GDAP1Q8TB36 358 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 KDM3AQ9Y4C1 1321 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 PSMD14O00487 310 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 FAM107AO95990 144 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms