RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 MCTP2Q6DN12 878 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 GIMAP8Q8ND71 665 aaPredicted RBP16.47■□□□□ 0.23
COL13A1-204ENST00000398975 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL13A1-204ENST00000398975 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 RNPEPQ9H4A4 650 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
COL13A1-204ENST00000398975 CD2BP2O95400 341 aaKnown RBP16.46■□□□□ 0.23
COL13A1-204ENST00000398975 SMIM10L2AP0DMW4 78 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 SMIM10L2BP0DMW5 78 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 ACTR2P61160 394 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 GPNMBQ14956 572 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 TRIM71Q2Q1W2 868 aaKnown RBP16.46■□□□□ 0.23
COL13A1-204ENST00000398975 PRR16Q569H4 304 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 EARS2Q5JPH6 523 aaKnown RBP16.46■□□□□ 0.23
COL13A1-204ENST00000398975 TMEM240Q5SV17 173 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 TBCKQ8TEA7 893 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
COL13A1-204ENST00000398975 SLC9A2Q9UBY0 812 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 TET1Q8NFU7 2136 aa16.46■□□□□ 0.23
COL13A1-204ENST00000398975 SZT2Q5T011 3432 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 FAM205CA6NFA0 338 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 DDX39AO00148 427 aaKnown RBP16.45■□□□□ 0.22
COL13A1-204ENST00000398975 LGR5O75473 907 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
COL13A1-204ENST00000398975 TRAF7Q6Q0C0 670 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 FAM177A1Q8N128 213 aaPredicted RBP16.45■□□□□ 0.22
COL13A1-204ENST00000398975 TMEM199Q8N511 208 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 GJA10Q969M2 543 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 IL23AQ9NPF7 189 aa16.45■□□□□ 0.22
COL13A1-204ENST00000398975 LAMA2P24043 3122 aaKnown RBP16.44■□□□□ 0.22
COL13A1-204ENST00000398975 IPO5O00410 1097 aaKnown RBP16.44■□□□□ 0.22
COL13A1-204ENST00000398975 ATG7O95352 703 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 TDP2O95551 362 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 USP11P51784 963 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 FOSBP53539 338 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 ADAM17P78536 824 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 PPIGQ13427 754 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL13A1-204ENST00000398975 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 TNFRSF25Q93038 417 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 SDF4Q9BRK5 362 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 SETD4Q9NVD3 440 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 WDR81Q562E7 1941 aa16.44■□□□□ 0.22
COL13A1-204ENST00000398975 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 MSH4O15457 936 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 TREHO43280 583 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 IQCF3P0C7M6 154 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 MARK3P27448 753 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 RBL2Q08999 1139 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 NR5A1Q13285 461 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 PTK7Q13308 1070 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 RABEP1Q15276 862 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 INF2Q27J81 1249 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 FAM109BQ6ICB4 259 aaPredicted RBP16.43■□□□□ 0.22
COL13A1-204ENST00000398975 SERINC5Q86VE9 423 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 LMBR1Q8WVP7 490 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 MBOAT7Q96N66 472 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 ZNF577Q9BSK1 485 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 CXXC1Q9P0U4 656 aaPredicted RBP16.43■□□□□ 0.22
COL13A1-204ENST00000398975 NOD1Q9Y239 953 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 EMSYQ7Z589 1322 aa16.43■□□□□ 0.22
COL13A1-204ENST00000398975 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 C17orf102A2RUQ5 167 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 SLC34A2O95436 690 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 CKBP12277 381 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 CYP3A7P24462 503 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 MBTPS1Q14703 1052 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 TCTN1Q2MV58 587 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 ABHD15Q6UXT9 468 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 ZBTB10Q96DT7 871 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 RNPC3Q96LT9 517 aaKnown RBP16.42■□□□□ 0.22
COL13A1-204ENST00000398975 OSBPL7Q9BZF2 842 aa16.42■□□□□ 0.22
COL13A1-204ENST00000398975 ZNF215Q9UL58 517 aaPredicted RBP16.42■□□□□ 0.22
COL13A1-204ENST00000398975 SLC37A4O43826 429 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 SETQ01105 290 aaPredicted RBP16.41■□□□□ 0.22
COL13A1-204ENST00000398975 BFSP2Q13515 415 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL13A1-204ENST00000398975 MARCH8Q5T0T0 291 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 KRT25Q7Z3Z0 450 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 CCDC60Q8IWA6 550 aaPredicted RBP16.41■□□□□ 0.22
COL13A1-204ENST00000398975 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 WASF1Q92558 559 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 GLG1Q92896 1179 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
COL13A1-204ENST00000398975 BACH2Q9BYV9 841 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 SMARCAD1Q9H4L7 1026 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 KAT6AQ92794 2004 aa16.41■□□□□ 0.22
COL13A1-204ENST00000398975 SIP14410 1827 aa16.4■□□□□ 0.22
COL13A1-204ENST00000398975 WNT7AO00755 349 aa16.4■□□□□ 0.22
COL13A1-204ENST00000398975 NBNO60934 754 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms