RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 VPS16Q9H269 839 aa14.58□□□□□ -0.08
TOP3B-202ENST00000398793 HPSEQ9Y251 543 aa14.58□□□□□ -0.08
TOP3B-202ENST00000398793 NKRFO15226 690 aaKnown RBP eCLIP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 CCZ1BP86790 482 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 CCZ1P86791 482 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 MMS22LQ6ZRQ5 1243 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 RDH13Q8NBN7 331 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 SYTL5Q8TDW5 730 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 MMTAG2Q9BU76 263 aaKnown RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 FGFBP2Q9BYJ0 223 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 PLIN4Q96Q06 1357 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 RANBP2P49792 3224 aaKnown RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 FER1L6Q2WGJ9 1857 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 BACH1O14867 736 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 SUGP1Q8IWZ8 645 aaKnown RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 MED4Q9NPJ6 270 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 A1CFQ9NQ94 594 aaKnown RBP14.57□□□□□ -0.08
TOP3B-202ENST00000398793 NOVP48745 357 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 PLA2G4FQ68DD2 849 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 SLC38A10Q9HBR0 1119 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 KCNH7Q9NS40 1196 aa14.57□□□□□ -0.08
TOP3B-202ENST00000398793 MAST2Q6P0Q8 1798 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 ICAM1P05362 532 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 USP14P54578 494 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 NPEPPSP55786 919 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 STK4Q13043 487 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 ELMO3Q96BJ8 720 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 GPBP1L1Q9HC44 474 aaPredicted RBP14.56□□□□□ -0.08
TOP3B-202ENST00000398793 GBA2Q9HCG7 927 aaPredicted RBP14.56□□□□□ -0.08
TOP3B-202ENST00000398793 PDE4DIPQ5VU43 2346 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 IPO5O00410 1097 aaKnown RBP14.56□□□□□ -0.08
TOP3B-202ENST00000398793 CDR1P51861 262 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 MNAT1P51948 309 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 GRB10Q13322 594 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 SWT1Q5T5J6 900 aaKnown RBP14.56□□□□□ -0.08
TOP3B-202ENST00000398793 TMC6Q7Z403 805 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 FAM160B2Q86V87 743 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 GPBP1Q86WP2 473 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 PSD3Q9NYI0 1048 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 VPS18Q9P253 973 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 GINS2Q9Y248 185 aa14.56□□□□□ -0.08
TOP3B-202ENST00000398793 MYMKA6NI61 221 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 PMS1P54277 932 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CC2D1AQ6P1N0 951 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CATSPER3Q86XQ3 398 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 DHX40Q8IX18 779 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CLEC4DQ8WXI8 215 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 COPS5Q92905 334 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 RANBP17Q9H2T7 1088 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 TSKSQ9UJT2 592 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 ATP8B1O43520 1251 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 HERVK_113P62684 666 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 MTMR1Q13613 665 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 PPP2R5AQ15172 486 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 PRAMEF19Q5SWL8 479 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CYFIP1Q7L576 1253 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 TRIM50Q86XT4 487 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 FAM177A1Q8N128 213 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 MICALL1Q8N3F8 863 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 RNF217Q8TC41 542 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 DDX12PQ92771 950 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 FAM84AQ96KN4 292 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 XPO4Q9C0E2 1151 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 SSC5DA1L4H1 1573 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 LAMB1P07942 1786 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CDC25BP30305 580 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 MRPS9P82933 396 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CEP55Q53EZ4 464 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 LENG1Q96BZ8 264 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 CARD6Q9BX69 1037 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 GPRC5CQ9NQ84 441 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 DNAI1Q9UI46 699 aa14.55□□□□□ -0.08
TOP3B-202ENST00000398793 HOOK1Q9UJC3 728 aaKnown RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 ZNF214Q9UL59 606 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-202ENST00000398793 NID2Q14112 1375 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 H3BQF6 201 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 USO1O60763 962 aaKnown RBP14.54□□□□□ -0.08
TOP3B-202ENST00000398793 URI1O94763 535 aaPredicted RBP14.54□□□□□ -0.08
TOP3B-202ENST00000398793 PRCPP42785 496 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 CORO7P57737 925 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 NLRP12P59046 1061 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 SKIDA1Q1XH10 827 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 USP50Q70EL3 339 aaPredicted RBP14.54□□□□□ -0.08
TOP3B-202ENST00000398793 CEP120Q8N960 986 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 PPP1R13BQ96KQ4 1090 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 PNMA5Q96PV4 448 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 PLEKHA4Q9H4M7 779 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 EXOC1Q9NV70 894 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 WRAP73Q9P2S5 460 aaPredicted RBP14.54□□□□□ -0.08
TOP3B-202ENST00000398793 SIPA1L1O43166 1804 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 NR3C2P08235 984 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 DSG3P32926 999 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 CST9Q5W186 159 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 PPP1R18Q6NYC8 613 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
TOP3B-202ENST00000398793 SV2BQ7L1I2 683 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms