RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 RASSF4Q9H2L5 321 aa14.43□□□□□ -0.1
PRAME-201ENST00000398741 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
PRAME-201ENST00000398741 USP17L15C9J2P7 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L13C9JLJ4 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L11C9JVI0 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L18D6R9N7 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L22D6RA61 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L17D6RBQ6 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L19D6RCP7 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 GOLGA8KD6RF30 607 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L20D6RJB6 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 CETN3O15182 167 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 SLC26A4O43511 780 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 OPA1O60313 960 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 HSF2BPO75031 334 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 PALMO75781 387 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 DNA2P51530 1060 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 MARSP56192 900 aaKnown RBP14.42□□□□□ -0.1
PRAME-201ENST00000398741 KLHL30Q0D2K2 578 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L24Q0WX57 530 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 ASIC2Q16515 512 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 MS4A14Q96JA4 679 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 RBM12Q9NTZ6 932 aaKnown RBP14.42□□□□□ -0.1
PRAME-201ENST00000398741 PPEF1O14829 653 aaPredicted RBP14.42□□□□□ -0.1
PRAME-201ENST00000398741 PPFIA4O75335 1185 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 CYP11B2P19099 503 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 TNFRSF8P28908 595 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
PRAME-201ENST00000398741 NAB2Q15742 525 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 ENOX2Q16206 610 aaKnown RBP14.42□□□□□ -0.1
PRAME-201ENST00000398741 SLC18A3Q16572 532 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 C10orf71Q711Q0 1435 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 IFT20Q8IY31 132 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 SLFN12Q8IYM2 578 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 SCFD1Q8WVM8 642 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 ANO3Q9BYT9 981 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 KANSL2Q9H9L4 492 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 PCDHA2Q9Y5H9 948 aa14.42□□□□□ -0.1
PRAME-201ENST00000398741 FTCDO95954 541 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 USP11P51784 963 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 PPFIA1Q13136 1202 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 FAM133AQ8N9E0 248 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 KCTD10Q9H3F6 313 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 KCNMB3Q9NPA1 279 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 PCDHA1Q9Y5I3 950 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 NR2F2P24468 414 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 KLRC1P26715 233 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 STAT3P40763 770 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 SCNN1DP51172 638 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 APBA1Q02410 837 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 KIAA0753Q2KHM9 967 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 EDRF1Q3B7T1 1238 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 ALS2CLQ60I27 953 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 CAVIN3Q969G5 261 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 ZC3H12CQ9C0D7 883 aaKnown RBP14.41□□□□□ -0.1
PRAME-201ENST00000398741 ADAMTS1Q9UHI8 967 aa14.41□□□□□ -0.1
PRAME-201ENST00000398741 PITPNM2Q9BZ72 1349 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 TRIM66O15016 1216 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 MED24O75448 989 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 KCNH2Q12809 1159 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 SP8Q8IXZ3 490 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 CERS5Q8N5B7 392 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 ERMNQ8TAM6 284 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 CCDC17Q96LX7 622 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 PLEKHA4Q9H4M7 779 aa14.4□□□□□ -0.1
PRAME-201ENST00000398741 A0A087X0T9 212 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 GRID2IPA4D2P6 1211 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 POTEFA5A3E0 1075 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 FAM228BP0C875 321 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 SLC20A2Q08357 652 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 NNTQ13423 1086 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 POTEGQ6S5H5 508 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 POTEEQ6S8J3 1075 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 GBP6Q6ZN66 633 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 DHX36Q9H2U1 1008 aaKnown RBP14.39□□□□□ -0.11
PRAME-201ENST00000398741 TMEM51Q9NW97 253 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 AIPL1Q9NZN9 384 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 HDAC9Q9UKV0 1011 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 FRMD3A2A2Y4 597 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 G3V3G9 751 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
PRAME-201ENST00000398741 HEXIM1O94992 359 aaKnown RBP14.39□□□□□ -0.11
PRAME-201ENST00000398741 SLC12A3P55017 1021 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 PAK2Q13177 524 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 AP3B2Q13367 1082 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 CDC37Q16543 378 aaPredicted RBP14.39□□□□□ -0.11
PRAME-201ENST00000398741 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 MEI1Q5TIA1 1274 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 ZC3H3Q8IXZ2 948 aaKnown RBP14.39□□□□□ -0.11
PRAME-201ENST00000398741 TSEN2Q8NCE0 465 aaKnown RBP14.39□□□□□ -0.11
PRAME-201ENST00000398741 TAF4BQ92750 862 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 TEKT1Q969V4 418 aa14.39□□□□□ -0.11
PRAME-201ENST00000398741 SPAG5Q96R06 1193 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms