RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 EVI5O60447 810 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 PSMD10O75832 226 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 ATG7O95352 703 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 SYN1P17600 705 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 FAAP100Q0VG06 881 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 FAM126BQ8IXS8 530 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 TMEM60Q9H2L4 133 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 KCNMB3Q9NPA1 279 aa17.87■□□□□ 0.45
MBD1-207ENST00000398488 ZMYND8Q9ULU4 1186 aaPredicted RBP17.87■□□□□ 0.45
MBD1-207ENST00000398488 SYT1P21579 422 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 MFSD10Q14728 455 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 KIAA0753Q2KHM9 967 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 B3GNT9Q6UX72 402 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 ABHD15Q6UXT9 468 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 ANKRD33Q7Z3H0 272 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 CTAGE1Q96RT6 745 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 UNC45AQ9H3U1 944 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 RNPEPQ9H4A4 650 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
MBD1-207ENST00000398488 HDAC6Q9UBN7 1215 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 KIF3AQ9Y496 699 aa17.86■□□□□ 0.45
MBD1-207ENST00000398488 TRIM43BA6NCK2 446 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 H0YGN5 161 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 H3BQV1 296 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 H3BRB1 525 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 B4GALT4O60513 344 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 LGR5O75473 907 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 CD4P01730 458 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 GCFC2P16383 781 aaKnown RBP17.85■□□□□ 0.45
MBD1-207ENST00000398488 ITGB8P26012 769 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 ZNF200P98182 395 aaPredicted RBP17.85■□□□□ 0.45
MBD1-207ENST00000398488 ZNF174Q15697 407 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 LRCH2Q5VUJ6 765 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 TRIM43Q96BQ3 446 aaPredicted RBP17.85■□□□□ 0.45
MBD1-207ENST00000398488 TUT1Q9H6E5 874 aaKnown RBP17.85■□□□□ 0.45
MBD1-207ENST00000398488 PDLIM7Q9NR12 457 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 TBC1D22BQ9NU19 505 aa17.85■□□□□ 0.45
MBD1-207ENST00000398488 IGKV6D-21A0A0A0MT36 114 aa17.84■□□□□ 0.45
MBD1-207ENST00000398488 FAM47CQ5HY64 1035 aa17.84■□□□□ 0.45
MBD1-207ENST00000398488 GDF6Q6KF10 455 aaPredicted RBP17.84■□□□□ 0.45
MBD1-207ENST00000398488 CCDC60Q8IWA6 550 aaPredicted RBP17.84■□□□□ 0.45
MBD1-207ENST00000398488 RIT2Q99578 217 aa17.84■□□□□ 0.45
MBD1-207ENST00000398488 VAV3Q9UKW4 847 aa17.84■□□□□ 0.45
MBD1-207ENST00000398488 EML1O00423 815 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 CHMP2AO43633 222 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 GAS7O60861 476 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 SUPT20HL2P0C7V6 817 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 ATP4AP20648 1035 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 MARK3P27448 753 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 MCM7P33993 719 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 GNL2Q13823 731 aaKnown RBP17.83■□□□□ 0.45
MBD1-207ENST00000398488 FERMT3Q86UX7 667 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 C4orf32Q8N8J7 132 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 TOX2Q96NM4 488 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 MTMR9Q96QG7 549 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 MTMR6Q9Y217 621 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 PCDHB6Q9Y5E3 794 aa17.83■□□□□ 0.45
MBD1-207ENST00000398488 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
MBD1-207ENST00000398488 TTC38Q5R3I4 469 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 ZNF746Q6NUN9 644 aaPredicted RBP17.82■□□□□ 0.44
MBD1-207ENST00000398488 SWSAP1Q6NVH7 229 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 NFRKBQ6P4R8 1299 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 TEKT3Q9BXF9 490 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 EMSYQ7Z589 1322 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 SMIM10L2AP0DMW4 78 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 SMIM10L2BP0DMW5 78 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 CYP2C9P11712 490 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 KRT76Q01546 638 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 SPIRE1Q08AE8 756 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 UGCGQ16739 394 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 SESTD1Q86VW0 696 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 GLG1Q92896 1179 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 WNT8BQ93098 351 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 ZBTB10Q96DT7 871 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 FAM20AQ96MK3 541 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 PRDM5Q9NQX1 630 aaPredicted RBP17.82■□□□□ 0.44
MBD1-207ENST00000398488 GTF2IRD1Q9UHL9 959 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 TBX21Q9UL17 535 aa17.82■□□□□ 0.44
MBD1-207ENST00000398488 UMODL1Q5DID0 1318 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 CEP290O15078 2479 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 DCDC2CA8MYV0 355 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 NEMFO60524 1076 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 CLTBP09497 229 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 HOXC8P31273 242 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 STAT5BP51692 787 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 RESTQ13127 1097 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 PLCB4Q15147 1175 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 CALCRLQ16602 461 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 FAM173BQ6P4H8 233 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 C7orf31Q8N865 590 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 NAP1L4Q99733 375 aaKnown RBP17.81■□□□□ 0.44
MBD1-207ENST00000398488 KATNAL1Q9BW62 490 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 SMARCAD1Q9H4L7 1026 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 DISC1Q9NRI5 854 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 SETD4Q9NVD3 440 aa17.81■□□□□ 0.44
MBD1-207ENST00000398488 TRIP12Q14669 1992 aaPredicted RBP17.8■□□□□ 0.44
MBD1-207ENST00000398488 TBX3O15119 743 aa17.8■□□□□ 0.44
MBD1-207ENST00000398488 ZNF862O60290 1169 aa17.8■□□□□ 0.44
MBD1-207ENST00000398488 PKP1Q13835 747 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms