RNA–Protein interactions for RNA: ENST00000398229.7

PDE9A-210, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-210ENST00000398229 MSL3P1P0C860 447 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 HERVK_113P62684 666 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 GUCY2DQ02846 1103 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 PNOCQ13519 176 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 RCN2Q14257 317 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 MEA1Q16626 185 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 CFAP221Q4G0U5 840 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 FBXL16Q8N461 479 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 TTC39CQ8N584 583 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 PDCD7Q8N8D1 485 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 NAT14Q8WUY8 206 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ATXN2LQ8WWM7 1075 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ISCUQ9H1K1 167 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 FAM32AQ9Y421 112 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 BCL9LQ86UU0 1499 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 MROH7-TTC4A0A0A0MT08 1334 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 TEX33O43247 280 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 HNRNPCL1O60812 293 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 UPP2O95045 317 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 UNC5CO95185 931 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 POLR2EP19388 210 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 BMP6P22004 513 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 HOXD10P28358 340 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 EZH2Q15910 746 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 FKBP15Q5T1M5 1219 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ST13P4Q8IZP2 240 aaPredicted RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 PPFIBP2Q8ND30 876 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 SPATA20Q8TB22 786 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ZNF274Q96GC6 653 aaPredicted RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 VPS50Q96JG6 964 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 PARVBQ9HBI1 364 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 TTC7AQ9ULT0 858 aaPredicted RBP12.13□□□□□ -0.47
PDE9A-210ENST00000398229 NFU1Q9UMS0 254 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 USP20Q9Y2K6 914 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 CLIC4Q9Y696 253 aa12.13□□□□□ -0.47
PDE9A-210ENST00000398229 ATP9AO75110 1047 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 CAPN15O75808 1086 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 HEXIM1O94992 359 aaKnown RBP12.12□□□□□ -0.47
PDE9A-210ENST00000398229 A1BGP04217 495 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 ZFYP08048 801 aaPredicted RBP12.12□□□□□ -0.47
PDE9A-210ENST00000398229 MYBP10242 640 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 VAV1P15498 845 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 CA8P35219 290 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 HSD17B3P37058 310 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 HALP42357 657 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 RASSF2P50749 326 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
PDE9A-210ENST00000398229 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 NDUFA5Q16718 116 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 PARP10Q53GL7 1025 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 PHLDB2Q86SQ0 1253 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 SPATA24Q86W54 205 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 CASP10Q92851 521 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 NUDCD1Q96RS6 583 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
PDE9A-210ENST00000398229 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 ECHDC1Q9NTX5 307 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 ABCF3Q9NUQ8 709 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
PDE9A-210ENST00000398229 ARL2BPQ9Y2Y0 163 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
PDE9A-210ENST00000398229 A0A1W2PQC6 194 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 CHL1O00533 1208 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 ZNF185O15231 689 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 PARNO95453 639 aaKnown RBP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 CTDNEP1O95476 244 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 CTNNA1P35221 906 aaKnown RBP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 MMP13P45452 471 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 RNF43Q68DV7 783 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 SLC2A7Q6PXP3 512 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 NUP93Q8N1F7 819 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 FNDC8Q8TC99 324 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 PGM2Q96G03 612 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 NKX1-2Q9UD57 310 aaPredicted RBP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 STK38LQ9Y2H1 464 aa12.11□□□□□ -0.47
PDE9A-210ENST00000398229 FAM208AQ9UK61 1670 aaKnown RBP12.11□□□□□ -0.47
PDE9A-210ENST00000398229 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms