RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 MRIQ9BWK5 157 aa20.27■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SLC12A3P55017 1021 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SLFN12Q8IYM2 578 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 MYH10P35580 1976 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 H0YIN7 160 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GFPT1Q06210 699 aaPredicted RBP20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 AP3B2Q13367 1082 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ANKRD13CQ8N6S4 541 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CYP2W1Q8TAV3 490 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 MBOAT7Q96N66 472 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 NCAPGQ9BPX3 1015 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 POLD4Q9HCU8 107 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SMCHD1A6NHR9 2005 aa20.26■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PDE2AO00408 941 aaPredicted RBP20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 MOCS3O95396 460 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CASP5P51878 434 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 LENG9Q96B70 501 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PRMT6Q96LA8 375 aaPredicted RBP20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PDE11AQ9HCR9 933 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 A0A1W2PRG0 241 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SPDYE3A6NKU9 549 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 USO1O60763 962 aaKnown RBP20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SYDE2Q5VT97 1194 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PDXDC1Q6P996 788 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 HDXQ7Z353 690 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CAGE1Q8TC20 777 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 TSGA10Q9BZW7 698 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 KCTD10Q9H3F6 313 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SH2D4AQ9H788 454 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SERPINA10Q9UK55 444 aa20.25■□□□□ 0.83
CHRFAM7A-202ENST00000397827 OPLAHO14841 1288 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PLSCR1O15162 318 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 NOL4O94818 638 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 USP14P54578 494 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CYP4A11Q02928 519 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 TDRD12Q587J7 1177 aaKnown RBP20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 HAUS3Q68CZ6 603 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GPATCH11Q8N954 259 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ANO9A1A5B4 782 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ZMYND10O75800 440 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SPATA31C1P0DKV0 1188 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 BMP3P12645 472 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GUCY2CP25092 1073 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ADAM9Q13443 819 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FOXR2Q6PJQ5 311 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SLC30A10Q6XR72 485 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GMCL1P1Q8NEA9 526 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GMCL1Q96IK5 515 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 LSM14BQ9BX40 385 aaKnown RBP20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SALL4Q9UJQ4 1053 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 POLR2FP61218 127 aaKnown RBP20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 RBM26Q5T8P6 1007 aaKnown RBP20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 HGSNATQ68CP4 663 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 TRIM58Q8NG06 486 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 PSMB7Q99436 277 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 BCAS3Q9H6U6 928 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 LCA5LO95447 670 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ECE1P42892 770 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 MAGEA1P43355 309 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 MOXD1Q6UVY6 613 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 EP400NLQ6ZTU2 488 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 TRIM59Q8IWR1 403 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CEP63Q96MT8 703 aa20.23■□□□□ 0.83
CHRFAM7A-202ENST00000397827 TLR2O60603 784 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 TACC1O75410 805 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 RASSF7Q02833 373 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GPS2Q13227 327 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 GIT2Q14161 759 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CASP8Q14790 479 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 WDR93Q6P2C0 686 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 HINFPQ9BQA5 517 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 REEP2Q9BRK0 252 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 MSH4O15457 936 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 N4BP1O75113 896 aaKnown RBP20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 SREBF1P36956 1147 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 C2orf54Q08AI8 447 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ASTE1Q2TB18 679 aaPredicted RBP20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 Q4G0T1 1027 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 JRKLQ9Y4A0 524 aa20.22■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 RPA1P27694 616 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 ARID5AQ03989 594 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CKAP4Q07065 602 aaKnown RBP20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 COG1Q8WTW3 980 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CEP72Q9P209 647 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 NR2F2P24468 414 aa20.21■□□□□ 0.83
CHRFAM7A-202ENST00000397827 CXCR5P32302 372 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms