RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 WDR60Q8WVS4 1066 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 UNC45AQ9H3U1 944 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 CNNM2Q9H8M5 875 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 TAB2Q9NYJ8 693 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 CDC40O60508 579 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRPM1-202ENST00000397795 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
TRPM1-202ENST00000397795 LAMC2Q13753 1193 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 RTN1Q16799 776 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 NUGGCQ68CJ6 796 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 MAP4K1Q92918 833 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRPM1-202ENST00000397795 TRIM45Q9H8W5 580 aaPredicted RBP9.78□□□□□ -0.84
TRPM1-202ENST00000397795 MRPL44Q9H9J2 332 aaKnown RBP9.78□□□□□ -0.84
TRPM1-202ENST00000397795 ZFP69BQ9UJL9 534 aa9.78□□□□□ -0.84
TRPM1-202ENST00000397795 NOVA2Q9UNW9 492 aaKnown RBP9.78□□□□□ -0.84
TRPM1-202ENST00000397795 SEC24CP53992 1094 aa9.77□□□□□ -0.84
TRPM1-202ENST00000397795 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.84
TRPM1-202ENST00000397795 CRELD2Q6UXH1 353 aaPredicted RBP9.77□□□□□ -0.84
TRPM1-202ENST00000397795 SH3BP5LQ7L8J4 393 aa9.77□□□□□ -0.84
TRPM1-202ENST00000397795 CATSPER2Q96P56 530 aa9.77□□□□□ -0.84
TRPM1-202ENST00000397795 CLEC4MQ9H2X3 399 aaPredicted RBP9.77□□□□□ -0.84
TRPM1-202ENST00000397795 ECT2Q9H8V3 914 aa9.77□□□□□ -0.84
TRPM1-202ENST00000397795 MRGBPQ9NV56 204 aa9.77□□□□□ -0.84
TRPM1-202ENST00000397795 DNALI1O14645 258 aaPredicted RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 SERPINB4P48594 390 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 EIF2B2P49770 351 aaKnown RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PPP2R2AP63151 447 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PLIN5Q00G26 463 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 DAB2IPQ5VWQ8 1189 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 DCUN1D2Q6PH85 259 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PLEKHF1Q96S99 279 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 ADGRL2O95490 1459 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 GOLGA8JA6NMD2 632 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 GOLGA8TH3BQL2 631 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 M0R3G1 203 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 BCRP11274 1271 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 NCF2P19878 526 aaPredicted RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 ADRM1Q16186 407 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 TCP11X2Q5H9J9 407 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 METTL24Q5JXM2 366 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 RASSF3Q86WH2 238 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 SH2D3CQ8N5H7 860 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PRPF18Q99633 342 aaKnown RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 MTA3Q9BTC8 594 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 MYOM2P54296 1465 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 ZNF518AQ6AHZ1 1483 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PIK3R4Q99570 1358 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 EIF4E1BA6NMX2 242 aaKnown RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 ASNA1O43681 348 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 DCTN2Q13561 401 aaKnown RBP9.77□□□□□ -0.85
TRPM1-202ENST00000397795 TUBA3CQ13748 450 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 RASGRP2Q7LDG7 609 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PHACTR3Q96KR7 559 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 CLIC6Q96NY7 704 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 C6orf50Q9HD87 102 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 PLAAQ9Y263 795 aa9.77□□□□□ -0.85
TRPM1-202ENST00000397795 CCT8L1PA6NM43 557 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 ZNF263O14978 683 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 DTHD1Q6ZMT9 781 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 FAM227BQ96M60 508 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 PDCD10Q9BUL8 212 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 NCOA5Q9HCD5 579 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 IPO11Q9UI26 975 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 HPS5Q9UPZ3 1129 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 HMGXB3Q12766 1538 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 HNRNPRO43390 633 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 SLC39A14Q15043 492 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 CAVIN4Q5BKX8 364 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 KHDRBS2Q5VWX1 349 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 OTUD7BQ6GQQ9 843 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 RNPC3Q96LT9 517 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 ELAC2Q9BQ52 826 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 WBP11Q9Y2W2 641 aaKnown RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 LIN7AO14910 233 aaPredicted RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 FAM200BP0CF97 657 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 SLC9A1P19634 815 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 SLC7A5Q01650 507 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 DPF2Q92785 391 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 PITPNM3Q9BZ71 974 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 KIF17Q9P2E2 1029 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 NFU1Q9UMS0 254 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 CLIC4Q9Y696 253 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 ADGRF5Q8IZF2 1346 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 HAUS5O94927 633 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 RTN3O95197 1032 aaPredicted RBP9.76□□□□□ -0.85
TRPM1-202ENST00000397795 CALM1P0DP23 149 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 CALM2P0DP24 149 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 CALM3P0DP25 149 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 WLSQ5T9L3 541 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 BEGAINQ9BUH8 593 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 PARVGQ9HBI0 331 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 USTQ9Y2C2 406 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 POC1B-GALNT4F8VUJ3 575 aa9.76□□□□□ -0.85
TRPM1-202ENST00000397795 GHRP10912 638 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms