RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DPCR1Q3MIW9 517 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 HS1BP3Q53T59 392 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 KCTD17Q8N5Z5 321 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 GPRASP2Q96D09 838 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 IL17RAQ96F46 866 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 BAG1Q99933 345 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 ZC3H4Q9UPT8 1303 aaKnown RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 POTEFA5A3E0 1075 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 K7ERI5 159 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 PDHXO00330 501 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 VWA5AO00534 786 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 PRPF6O94906 941 aaKnown RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 POTEIP0CG38 1075 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 EEF1GP26641 437 aaKnown RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 INHBEP58166 350 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 YWHAEP62258 255 aaKnown RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SPECC1LQ69YQ0 1117 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 POTEGQ6S5H5 508 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SHC4Q6S5L8 630 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 POTEEQ6S8J3 1075 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 DPH6Q7L8W6 267 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 LMBR1Q8WVP7 490 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SEPT1Q8WYJ6 367 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 KLRG1Q96E93 195 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SPATC1LQ9H0A9 340 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 KCNH4Q9UQ05 1017 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 ROBO3Q96MS0 1386 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 NEBLO76041 1014 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 CYP2B6P20813 491 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 PSMC2P35998 433 aaKnown RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 LRRC41Q15345 812 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 PLEKHH3Q7Z736 793 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SMAP1Q8IYB5 467 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 TAAR1Q96RJ0 339 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 SEL1LQ9UBV2 794 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 RWDD2AQ9UIY3 292 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 URI1O94763 535 aaPredicted RBP9.1□□□□□ -0.95
PTPRD-204ENST00000397606 TNNT1P13805 278 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 STAT5BP51692 787 aa9.1□□□□□ -0.95
PTPRD-204ENST00000397606 PP2D1A8MPX8 630 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 XPOTO43592 962 aaKnown RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 GH1P01241 217 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 TMEM191BP0C7N4 346 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 KRT9P35527 623 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SREBF1P36956 1147 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 GNG11P61952 73 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 LRRC63Q05C16 580 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 PKN1Q16512 942 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SLC9C1Q4G0N8 1177 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 GBP6Q6ZN66 633 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 ENOX1Q8TC92 643 aaKnown RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 PSPC1Q8WXF1 523 aaKnown RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 XPO4Q9C0E2 1151 aaKnown RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SMIM22K7EJ46 135 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 EYA4O95677 639 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 RGS2P41220 211 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 PEX3P56589 373 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 ASIC2Q16515 512 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 XKR3Q5GH77 459 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SMYD4Q8IYR2 804 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 RNF169Q8NCN4 708 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 CCDC127Q96BQ5 260 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 C16orf45Q96MC5 204 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 FAM184BQ9ULE4 1060 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 AGTPBP1Q9UPW5 1226 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 ABCA3Q99758 1704 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 TACC1O75410 805 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 TUBB4AP04350 444 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 TNFAIP3P21580 790 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 OR6J1Q8NGC5 347 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 ASCC2Q9H1I8 757 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 KCNH7Q9NS40 1196 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 ITGB4P16144 1822 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SRGAP2CP0DJJ0 459 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 ATF7P17544 494 aaPredicted RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SNX16P57768 344 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 CUL4BQ13620 913 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 SLFN12LQ6IEE8 588 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 FAM186BQ8IYM0 893 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 C7orf31Q8N865 590 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 RDM1Q8NG50 284 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 CNOT6LQ96LI5 555 aaKnown RBP9.09□□□□□ -0.95
PTPRD-204ENST00000397606 NLRP4Q96MN2 994 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 NOX5Q96PH1 765 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 MTRQ99707 1265 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 TIPINQ9BVW5 301 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 GOLPH3LQ9H4A5 285 aa9.09□□□□□ -0.95
PTPRD-204ENST00000397606 NHSQ6T4R5 1651 aa9.09□□□□□ -0.96
PTPRD-204ENST00000397606 STRNO43815 780 aa9.08□□□□□ -0.96
PTPRD-204ENST00000397606 DLATP10515 647 aaKnown RBP9.08□□□□□ -0.96
PTPRD-204ENST00000397606 Q3C1V9 767 aa9.08□□□□□ -0.96
PTPRD-204ENST00000397606 CYP26C1Q6V0L0 522 aa9.08□□□□□ -0.96
PTPRD-204ENST00000397606 FAM49AQ9H0Q0 323 aaPredicted RBP9.08□□□□□ -0.96
PTPRD-204ENST00000397606 FAM207AQ9NSI2 230 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms