RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 SMCO2A6NFE2 343 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 PGRMC1O00264 195 aaKnown RBP10.21□□□□□ -0.77
UCA1-201ENST00000397381 DNM1LO00429 736 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 FAM228BP0C875 321 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 ANXA13P27216 316 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 RAPGEF1Q13905 1077 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 PDIA5Q14554 519 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 NBPF9Q3BBW0 867 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 C12orf60Q5U649 245 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 RAPGEF5Q92565 580 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 MTMR9Q96QG7 549 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 BSDC1Q9NW68 430 aaPredicted RBP10.21□□□□□ -0.77
UCA1-201ENST00000397381 MCM9Q9NXL9 1143 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 BZW2Q9Y6E2 419 aaKnown RBP10.21□□□□□ -0.77
UCA1-201ENST00000397381 ESYT2A0FGR8 921 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 TRAF5O00463 557 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 CEP104O60308 925 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 ZPR1O75312 459 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 SMARCA1P28370 1054 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 SCTRP47872 440 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 EIF3BP55884 814 aaKnown RBP10.21□□□□□ -0.78
UCA1-201ENST00000397381 CALCRLQ16602 461 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 DYMQ7RTS9 669 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 TRIM59Q8IWR1 403 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 CCDC26Q8TAB7 109 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 LMBR1Q8WVP7 490 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.21□□□□□ -0.781e-7■□□□□ 9.3
UCA1-201ENST00000397381 FAM114A2Q9NRY5 505 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 FBXL5Q9UKA1 691 aa10.21□□□□□ -0.78
UCA1-201ENST00000397381 PACSIN2Q9UNF0 486 aaPredicted RBP10.21□□□□□ -0.78
UCA1-201ENST00000397381 MYH4Q9Y623 1939 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 KLRF2D3W0D1 207 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 SART1O43290 800 aaKnown RBP10.2□□□□□ -0.78
UCA1-201ENST00000397381 CAMTA2O94983 1202 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 DRD4P21917 467 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 TXKP42681 527 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 RNASE9P60153 205 aaKnown RBP10.2□□□□□ -0.78
UCA1-201ENST00000397381 BYSLQ13895 437 aaKnown RBP10.2□□□□□ -0.78
UCA1-201ENST00000397381 QPCTQ16769 361 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 OR2W6PQ8NHA6 318 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 TBCKQ8TEA7 893 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 UBLCP1Q8WVY7 318 aaPredicted RBP10.2□□□□□ -0.78
UCA1-201ENST00000397381 DDX12PQ92771 950 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 N4BP2L2Q92802 583 aaPredicted RBP10.2□□□□□ -0.78
UCA1-201ENST00000397381 GANQ9H2C0 597 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 ATP6V0A4Q9HBG4 840 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 MKNK2Q9HBH9 465 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 CCDC87Q9NVE4 849 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 HAUS2Q9NVX0 235 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 BCCIPQ9P287 314 aaKnown RBP eCLIP10.2□□□□□ -0.78
UCA1-201ENST00000397381 TPX2Q9ULW0 747 aaKnown RBP10.2□□□□□ -0.78
UCA1-201ENST00000397381 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.2□□□□□ -0.78
UCA1-201ENST00000397381 KIF13BQ9NQT8 1826 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 STRCP1A6NGW2 1772 aa10.2□□□□□ -0.78
UCA1-201ENST00000397381 USP17L8P0C7I0 530 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 TSPY3P0CV98 308 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 TSPY8P0CW00 308 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 GCFC2P16383 781 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 KRT79Q5XKE5 535 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 CPLX4Q7Z7G2 160 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 REXO1Q8N1G1 1221 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 RASGEF1CQ8N431 466 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 LRRC57Q8N9N7 239 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 SEC14L1Q92503 715 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 CCT6BQ92526 530 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 HVCN1Q96D96 273 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 PSMD1Q99460 953 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 PACSIN1Q9BY11 444 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 ADAMTS1Q9UHI8 967 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
UCA1-201ENST00000397381 COL4A1P02462 1669 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 hCG_1984214I3L0E3 225 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 KRIT1O00522 736 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 CLGNO14967 610 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 MGRN1O60291 552 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 GSTA1P08263 222 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 TMOD1P28289 359 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 COASYQ13057 564 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 LRRC41Q15345 812 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 SF3B3Q15393 1217 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 KRT71Q3SY84 523 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 FAM26FQ5R3K3 315 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 SPTY2D1Q68D10 685 aaPredicted RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 INTS5Q6P9B9 1019 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 TMC3Q7Z5M5 1100 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 ZNF444Q8N0Y2 327 aaPredicted RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 ZNF713Q8N859 430 aaPredicted RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 SNX29Q8TEQ0 813 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 TLCD1Q96CP7 247 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 NEUROG2Q9H2A3 272 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 CNOT8Q9UFF9 292 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 SEC63Q9UGP8 760 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 MINPP1Q9UNW1 487 aa10.19□□□□□ -0.78
UCA1-201ENST00000397381 NOC2LQ9Y3T9 749 aaKnown RBP10.19□□□□□ -0.78
UCA1-201ENST00000397381 A0A0A6YYK5 440 aaPredicted RBP10.18□□□□□ -0.78
UCA1-201ENST00000397381 USP17L3A6NCW0 530 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms