RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PLVAPQ9BX97 442 aa17.36■□□□□ 0.37
SEC13-206ENST00000397102 IGFLR1Q9H665 355 aa17.36■□□□□ 0.37
SEC13-206ENST00000397102 BCAS3Q9H6U6 928 aa17.36■□□□□ 0.37
SEC13-206ENST00000397102 ZSWIM5Q9P217 1185 aa17.36■□□□□ 0.37
SEC13-206ENST00000397102 ZNF215Q9UL58 517 aaPredicted RBP17.36■□□□□ 0.37
SEC13-206ENST00000397102 TMEM221A6NGB7 291 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 GCOM1H8Y6P7 765 aaPredicted RBP17.35■□□□□ 0.37
SEC13-206ENST00000397102 M0R296 226 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 ST18O60284 1047 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 EYA4O95677 639 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 POLR2MP0CAP2 368 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 ICAM3P32942 547 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 NDUFV1P49821 464 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 ARHGAP4P98171 946 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 BTG3Q14201 252 aaPredicted RBP17.35■□□□□ 0.37
SEC13-206ENST00000397102 TRIM67Q6ZTA4 783 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 PBXIP1Q96AQ6 731 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 MSLNLQ96KJ4 702 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 GPR20Q99678 358 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 EHMT1Q9H9B1 1298 aa17.35■□□□□ 0.37
SEC13-206ENST00000397102 KLRF2D3W0D1 207 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 STAM2O75886 525 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 CHRNA1P02708 482 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 GHRP10912 638 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 TRAF1Q13077 416 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 CAMK1Q14012 370 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 IER5LQ5T953 404 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 FCHSD1Q86WN1 690 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 TRIM50Q86XT4 487 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 SUGP1Q8IWZ8 645 aaKnown RBP17.34■□□□□ 0.37
SEC13-206ENST00000397102 P2RX5Q93086 422 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
SEC13-206ENST00000397102 C5orf42Q9H799 3197 aa17.34■□□□□ 0.37
SEC13-206ENST00000397102 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 NRCAMQ92823 1304 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 ENPP3O14638 875 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 CSPG5O95196 566 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
SEC13-206ENST00000397102 MGAT3Q09327 533 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 LPIN1Q14693 890 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 NAALADL2Q58DX5 795 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
SEC13-206ENST00000397102 TAF2Q6P1X5 1199 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 SMRP1Q8NCR6 262 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 RILPL2Q969X0 211 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 UBAC1Q9BSL1 405 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 KRT23Q9C075 422 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 ALG13Q9NP73 1137 aaKnown RBP17.33■□□□□ 0.36
SEC13-206ENST00000397102 MAD2L2Q9UI95 211 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 PLAGL2Q9UPG8 496 aa17.33■□□□□ 0.36
SEC13-206ENST00000397102 SPATA31C2B4DYI2 1134 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 LOC730098B7Z3J9 87 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 FIBPO43427 364 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 DGKIO75912 1065 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 SDSP20132 328 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 ZXDAP98168 799 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 TCF15Q12870 199 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 COASYQ13057 564 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 SEMA3FQ13275 785 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 UTP14CQ5TAP6 766 aaKnown RBP17.32■□□□□ 0.36
SEC13-206ENST00000397102 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 PIAS4Q8N2W9 510 aaPredicted RBP17.32■□□□□ 0.36
SEC13-206ENST00000397102 EFHBQ8N7U6 833 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 CLEC1BQ9P126 229 aa17.32■□□□□ 0.36
SEC13-206ENST00000397102 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
SEC13-206ENST00000397102 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
SEC13-206ENST00000397102 CBX2Q14781 532 aaPredicted RBP17.31■□□□□ 0.36
SEC13-206ENST00000397102 IMMTQ16891 758 aaKnown RBP17.31■□□□□ 0.36
SEC13-206ENST00000397102 RUFY4Q6ZNE9 571 aa17.31■□□□□ 0.36
SEC13-206ENST00000397102 RSPH3Q86UC2 560 aa17.31■□□□□ 0.36
SEC13-206ENST00000397102 FBXL6Q8N531 539 aa17.31■□□□□ 0.36
SEC13-206ENST00000397102 CNNM2Q9H8M5 875 aa17.31■□□□□ 0.36
SEC13-206ENST00000397102 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
SEC13-206ENST00000397102 MRPL42Q9Y6G3 142 aaKnown RBP17.31■□□□□ 0.36
SEC13-206ENST00000397102 ITGB1P05556 798 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 DNAJB1P25685 340 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 SEC23AQ15436 765 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 FBXO47Q5MNV8 452 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 ADGRD2Q7Z7M1 963 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 CMTR2Q8IYT2 770 aaKnown RBP17.3■□□□□ 0.36
SEC13-206ENST00000397102 SPPL3Q8TCT6 385 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 PIGSQ96S52 555 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 SENP7Q9BQF6 1050 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 RIOX1Q9H6W3 641 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 TELO2Q9Y4R8 837 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 PLXNA4Q9HCM2 1894 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
SEC13-206ENST00000397102 TRIOO75962 3097 aa17.3■□□□□ 0.36
SEC13-206ENST00000397102 SIGLEC14Q08ET2 396 aa17.29■□□□□ 0.36
SEC13-206ENST00000397102 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
SEC13-206ENST00000397102 TSHZ1Q6ZSZ6 1077 aa17.29■□□□□ 0.36
SEC13-206ENST00000397102 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
SEC13-206ENST00000397102 ZDBF2Q9HCK1 2354 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 NRIP1P48552 1158 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 SP4Q02446 784 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
SEC13-206ENST00000397102 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms