RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 HOXC10Q9NYD6 342 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 OCM2P0CE71 109 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 OCMP0CE72 109 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 MYBP10242 640 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 SMYD4Q8IYR2 804 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 OPHN1O60890 802 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 EHHADHQ08426 723 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-208ENST00000397030 CXorf38Q8TB03 319 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 TOM1L1O75674 476 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 KCNA1Q09470 495 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 TCP11Q8WWU5 503 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 TMEM206Q9H813 350 aa18.84■□□□□ 0.61
MCF2L-208ENST00000397030 ZFYVE16Q7Z3T8 1539 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 H2AFZP0C0S5 128 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 ARL4DP49703 201 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 H2AFVQ71UI9 128 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 TRIM58Q8NG06 486 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 PASKQ96RG2 1323 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 PI16Q6UXB8 463 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 GLYCTKQ8IVS8 523 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 HYOU1Q9Y4L1 999 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 ORC6Q9Y5N6 252 aa18.83■□□□□ 0.61
MCF2L-208ENST00000397030 CREB3O43889 395 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 TUBBP07437 444 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 CDK8P49336 464 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 COA1Q9GZY4 146 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 PPARGP37231 505 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-208ENST00000397030 PTK2BQ14289 1009 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 SPATA33Q96N06 139 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 MTMR1Q13613 665 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 PTPN21Q16825 1174 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 APOBEC3FQ8IUX4 373 aaKnown RBP18.83■□□□□ 0.6
MCF2L-208ENST00000397030 PDCD7Q8N8D1 485 aaKnown RBP18.83■□□□□ 0.6
MCF2L-208ENST00000397030 OR8K1Q8NGG5 319 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 CFAP61Q8NHU2 1237 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 ZNF274Q96GC6 653 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-208ENST00000397030 GCNT4Q9P109 453 aa18.83■□□□□ 0.6
MCF2L-208ENST00000397030 IRX4P78413 519 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 TRIM68Q6AZZ1 485 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 LRRC8CQ8TDW0 803 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 EDEM3Q9BZQ6 932 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 PRPF4O43172 522 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■□□ 15.4
MCF2L-208ENST00000397030 ATP1A2P50993 1020 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 TMED2Q15363 201 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 MUM1Q2TAK8 710 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 FCER1AP12319 257 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 VCPP55072 806 aaKnown RBP18.82■□□□□ 0.6
MCF2L-208ENST00000397030 SPON1Q9HCB6 807 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 DRP2Q13474 957 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 TUBB2AQ13885 445 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 PPP6R3Q5H9R7 873 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-208ENST00000397030 SUSD4Q5VX71 490 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 TUBB2BQ9BVA1 445 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 SART1O43290 800 aaKnown RBP18.82■□□□□ 0.6
MCF2L-208ENST00000397030 HUS1O60921 280 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 TFRCP02786 760 aaKnown RBP18.82■□□□□ 0.6
MCF2L-208ENST00000397030 CYP4F22Q6NT55 531 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 PIGOQ8TEQ8 1089 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 RMDN3Q96TC7 470 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 KLHL14Q9P2G3 628 aa18.82■□□□□ 0.6
MCF2L-208ENST00000397030 ZNF568Q3ZCX4 644 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 SGO2Q562F6 1265 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 TRAPPC10P48553 1259 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 NME3Q13232 169 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 FSD1LQ9BXM9 530 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 INPP5BP32019 993 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 SMAD1Q15797 465 aaKnown RBP18.81■□□□□ 0.6
MCF2L-208ENST00000397030 ASIC4Q96FT7 647 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 NR1H4Q96RI1 486 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-208ENST00000397030 IQCA1LA6NCM1 817 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 CTSHP09668 335 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 IRF1P10914 325 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 STMN1P16949 149 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 FBXL13Q8NEE6 735 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 PASD1Q8IV76 773 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 FAM133AQ8N9E0 248 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
MCF2L-208ENST00000397030 LRRD1A4D1F6 860 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 CFAP69A5D8W1 941 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 ASMTLO95671 621 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 ADORA2BP29275 332 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 MAP3K21Q5TCX8 1036 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PPP2R3CQ969Q6 453 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 POLR3EQ9NVU0 708 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PIGBQ92521 554 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 TSC1Q92574 1164 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PPWD1Q96BP3 646 aaKnown RBP18.8■□□□□ 0.6
MCF2L-208ENST00000397030 IMPACTQ9P2X3 320 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PCGF5Q86SE9 256 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 ERO1AQ96HE7 468 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PARVGQ9HBI0 331 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 MAP10Q9P2G4 905 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 PSMA2P25787 234 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 UBE2Q2Q8WVN8 375 aa18.8■□□□□ 0.6
MCF2L-208ENST00000397030 NGRNQ9NPE2 291 aaKnown RBP18.8■□□□□ 0.6
MCF2L-208ENST00000397030 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms