RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SCTRP47872 440 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 LRIG3Q6UXM1 1119 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 AK8Q96MA6 479 aa26.32■■□□□ 1.8
CSNK1E-203ENST00000396832 LAD1O00515 517 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 RASA1P20936 1047 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 RAPGEF1Q13905 1077 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 ODF2Q5BJF6 829 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 PDXDC1Q6P996 788 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 KRT25Q7Z3Z0 450 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 REXO1Q8N1G1 1221 aaKnown RBP26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 DAGLBQ8NCG7 672 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 CUEDC2Q9H467 287 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 TAF1DQ9H5J8 278 aaPredicted RBP26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 C6orf50Q9HD87 102 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 GRID2IPA4D2P6 1211 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 TRAF5O00463 557 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 LDHBP07195 334 aaKnown RBP26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 KLRC1P26715 233 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 KCNMA1Q12791 1236 aa26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 SF3B3Q15393 1217 aaKnown RBP26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 CCDC84Q86UT8 332 aaPredicted RBP26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 LSM14BQ9BX40 385 aaKnown RBP26.31■■□□□ 1.8
CSNK1E-203ENST00000396832 ANKIB1Q9P2G1 1089 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 H0YGN5 161 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 TLR2O60603 784 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 PAX7P23759 505 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 TNNI2P48788 182 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 ECM1Q16610 540 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 HGSNATQ68CP4 663 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 LRRC55Q6ZSA7 311 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 TEX11Q8IYF3 940 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 CACNA2D3Q8IZS8 1091 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 TBC1D5Q92609 795 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 NFS1Q9Y697 457 aa26.3■■□□□ 1.8
CSNK1E-203ENST00000396832 CRYMQ14894 314 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 FAXDC2Q96IV6 333 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 EYA3Q99504 573 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 ZHX3Q9H4I2 956 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 USP17L5A8MUK1 530 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 OPLAHO14841 1288 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 CLNS1AP54105 237 aaKnown RBP26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 UBE2SQ16763 222 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 FAM133AQ8N9E0 248 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 MARCH10Q8NA82 808 aaPredicted RBP26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 INPP4AQ96PE3 977 aaPredicted RBP26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 ADAMTS1Q9UHI8 967 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 NPHP3-ACAD11A0A0J9YXS1 232 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 CTNNA1P35221 906 aaKnown RBP26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 ERVK-9P63128 1117 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 TNNC1P63316 161 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 ZNF844Q08AG5 666 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 BYSLQ13895 437 aaKnown RBP26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 UAP1Q16222 522 aaPredicted RBP26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 UNC13DQ70J99 1090 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 ISCUQ9H1K1 167 aa26.29■■□□□ 1.8
CSNK1E-203ENST00000396832 FRMD3A2A2Y4 597 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 RAPGEF5Q92565 580 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 SSU72P8A0A1W2PR75 194 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 PPP1R2P41236 205 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 SATB1Q01826 763 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 XRCC4Q13426 336 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 PPP2R5AQ15172 486 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 MEI1Q5TIA1 1274 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 LRRC47Q8N1G4 583 aaKnown RBP26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 CEP95Q96GE4 821 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 MAGEF1Q9HAY2 307 aa26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 CNOT8Q9UFF9 292 aaKnown RBP26.28■■□□□ 1.8
CSNK1E-203ENST00000396832 NEBLO76041 1014 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 SLC8A1P32418 973 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 LACTB2Q53H82 288 aaPredicted RBP26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 NBPF5PQ86XG9 351 aaPredicted RBP26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 USP38Q8NB14 1042 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 LINC00116Q8NCU8 138 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 MYBP10242 640 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 GNA11P29992 359 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 ECHS1P30084 290 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 PPP2R2AP63151 447 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 BIRC3Q13489 604 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 FAM83BQ5T0W9 1011 aa26.27■■□□□ 1.8
CSNK1E-203ENST00000396832 C5orf60A6NFR6 353 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 IFFO1Q0D2I5 559 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 NAB2Q15742 525 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 KIAA0753Q2KHM9 967 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 TLDC1Q6P9B6 456 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 RUFY4Q6ZNE9 571 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 DDX42Q86XP3 938 aaKnown RBP eCLIP26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 NLRP3Q96P20 1036 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 ATP6V0A4Q9HBG4 840 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 A0A087X0T9 212 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 RPSAP08865 295 aaKnown RBP26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 FAM228BP0C875 321 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 SFMBT2Q5VUG0 894 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 KIRREL3Q8IZU9 778 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 HVCN1Q96D96 273 aa26.26■■□□□ 1.79
CSNK1E-203ENST00000396832 A0A1B0GUA9 196 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 PHF20L1A8MW92 1017 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 RBAK-RBAKDNI3L0D1 243 aa26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 GKAP1Q5VSY0 366 aaPredicted RBP26.25■■□□□ 1.79
CSNK1E-203ENST00000396832 GALNT17Q6IS24 598 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms