RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SP4Q02446 784 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 PLEKHG4Q58EX7 1191 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 BLOC1S2Q6QNY1 142 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
NEDD8-202ENST00000396828 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.514e-7■■□□□ 13.3
NEDD8-202ENST00000396828 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
NEDD8-202ENST00000396828 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-202ENST00000396828 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-202ENST00000396828 ADAM17P78536 824 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 HTRA4P83105 476 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-202ENST00000396828 ADCK5Q3MIX3 580 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
NEDD8-202ENST00000396828 METTL7BQ6UX53 244 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 RUFY3Q7L099 469 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 MYOCDQ8IZQ8 938 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 HLA-CQ95604 372 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 TGS1Q96RS0 853 aaKnown RBP11.87□□□□□ -0.51
NEDD8-202ENST00000396828 LRRC2Q9BYS8 371 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 EPHX3Q9H6B9 360 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
NEDD8-202ENST00000396828 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
NEDD8-202ENST00000396828 SH2B2O14492 632 aaPredicted RBP11.86□□□□□ -0.51
NEDD8-202ENST00000396828 FIBPO43427 364 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 PRC1O43663 620 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 UPP2O95045 317 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 MCM2P49736 904 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 SART3Q15020 963 aaKnown RBP11.86□□□□□ -0.51
NEDD8-202ENST00000396828 GNPTABQ3T906 1256 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 PCNX4Q63HM2 1172 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 RUFY4Q6ZNE9 571 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 HSCBQ8IWL3 235 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 CCDC82Q8N4S0 544 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 ZBTB10Q96DT7 871 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
NEDD8-202ENST00000396828 SPZ1Q9BXG8 430 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
NEDD8-202ENST00000396828 COG5Q9UP83 839 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
NEDD8-202ENST00000396828 GSTTP1A0A1W2PQM5 241 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 PIK3CDO00329 1044 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 EFCAB14O75071 495 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 STAM2O75886 525 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 DDAH1O94760 285 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 CHRNA1P02708 482 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 KCNA2P16389 499 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 ITGB5P18084 799 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 MCM5P33992 734 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 FGD1P98174 961 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 TRAF1Q13077 416 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 NEDD9Q14511 834 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 ANKRD1Q15327 319 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 UBE2SQ16763 222 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 AAK1Q2M2I8 961 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 DHX32Q7L7V1 743 aaKnown RBP11.85□□□□□ -0.51
NEDD8-202ENST00000396828 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-202ENST00000396828 LMBR1Q8WVP7 490 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 TOP1MTQ969P6 601 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 SNX21Q969T3 373 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 PDRG1Q9NUG6 133 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 PKD2L1Q9P0L9 805 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 INSL6Q9Y581 213 aa11.85□□□□□ -0.51
NEDD8-202ENST00000396828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-202ENST00000396828 AMHP03971 560 aa11.84□□□□□ -0.51
NEDD8-202ENST00000396828 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-202ENST00000396828 ARHGAP4P98171 946 aa11.84□□□□□ -0.51
NEDD8-202ENST00000396828 EPC2Q52LR7 807 aa11.84□□□□□ -0.51
NEDD8-202ENST00000396828 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-202ENST00000396828 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
NEDD8-202ENST00000396828 SENP7Q9BQF6 1050 aa11.84□□□□□ -0.51
NEDD8-202ENST00000396828 LMCD1Q9NZU5 365 aa11.84□□□□□ -0.51
NEDD8-202ENST00000396828 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
NEDD8-202ENST00000396828 MYO7AQ13402 2215 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 NLRC5Q86WI3 1866 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 KAT6AQ92794 2004 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 MARK3P27448 753 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 KIF5BP33176 963 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 FAM26DQ5JW98 314 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 MARCH8Q5T0T0 291 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 TYW1BQ6NUM6 668 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 NFXL1Q6ZNB6 911 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-202ENST00000396828 CYP2W1Q8TAV3 490 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 SEPT8Q92599 483 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 CUL5Q93034 780 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 PCYT2Q99447 389 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 UBE2ZQ9H832 354 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-202ENST00000396828 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
NEDD8-202ENST00000396828 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
NEDD8-202ENST00000396828 CCDC69A6NI79 296 aa11.82□□□□□ -0.52
NEDD8-202ENST00000396828 K7ELQ4 463 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-202ENST00000396828 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms