RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ANGPT1Q15389 498 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 CATSPER1Q8NEC5 780 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 FAM167BQ9BTA0 163 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SNX14Q9Y5W7 946 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 ATP2B4P23634 1241 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SLC7A5Q01650 507 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SLC39A6Q13433 755 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 IMPG1Q17R60 797 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 PPP6R3Q5H9R7 873 aaPredicted RBP11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SLC12A6Q9UHW9 1150 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 AOC3Q16853 763 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 OLFML2BQ68BL8 750 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 OTUD7BQ6GQQ9 843 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 TRPM2O94759 1503 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 HADHAP40939 763 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 EFTUD2Q15029 972 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL4A4-201ENST00000396625 ECT2Q9H8V3 914 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 HNRNPDLO14979 420 aaKnown RBP11.09□□□□□ -0.63
COL4A4-201ENST00000396625 PRDM1O75626 825 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 GTSE1Q9NYZ3 720 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 MYO9BQ13459 2157 aa11.09□□□□□ -0.63
COL4A4-201ENST00000396625 ARIH2O95376 493 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 PYGMP11217 842 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 AARSP49588 968 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 FAM173BQ6P4H8 233 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ANKRD36BP1Q96IX9 119 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 SNX25Q9H3E2 840 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 LINS1Q8NG48 757 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ARL4AP40617 200 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 NLRP9Q7RTR0 991 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 LUZP2Q86TE4 346 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 THOC1Q96FV9 657 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 MYH15Q9Y2K3 1946 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 NOS1P29475 1434 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 XKR9Q5GH70 373 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ZNF555Q8NEP9 628 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ZMYM6O95789 1325 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 CHUKO15111 745 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 JAK2O60674 1132 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 DRP2Q13474 957 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 RBBP7Q16576 425 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ZNF233A6NK53 670 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 DNAJC24Q6P3W2 148 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 COL4A3BPQ9Y5P4 624 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 KIAA0586Q9BVV6 1533 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 MED7O43513 233 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 PRPSAP2O60256 369 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 VCPP55072 806 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 NR1H3Q13133 447 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 MED21Q13503 144 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 ARMCX5Q6P1M9 558 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 MMTAG2Q9BU76 263 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 SLC5A4Q9NY91 659 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 RTCBQ9Y3I0 505 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 SERPINB1P30740 379 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 TSPY1Q01534 308 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 SMCR8Q8TEV9 937 aaPredicted RBP11.08□□□□□ -0.64
COL4A4-201ENST00000396625 GJA10Q969M2 543 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 COQ7Q99807 217 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
COL4A4-201ENST00000396625 FAM47CQ5HY64 1035 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 PDIK1LQ8N165 341 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TMEM63CQ9P1W3 806 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 NOVA2Q9UNW9 492 aaKnown RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 PLCH2O75038 1416 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 CCDC151A5D8V7 595 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 GSPT1P15170 499 aaKnown RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TNNI3KQ59H18 835 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 FPGT-TNNI3KV9GXZ4 949 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 SYNDIG1LA6NDD5 238 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 ADCY3O60266 1144 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 IRX1P78414 480 aaPredicted RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 LVRNQ6Q4G3 990 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TMEM245Q9H330 911 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 RASA4BC9J798 803 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 RASA4O43374 803 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 PPP1R2P3Q6NXS1 205 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 CYGBQ8WWM9 190 aa11.07□□□□□ -0.64
COL4A4-201ENST00000396625 TUBGCP2Q9BSJ2 902 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms