RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GEMIN8Q9NWZ8 242 aaKnown RBP14.67□□□□□ -0.06
TRIM40-207ENST00000396581 NFU1Q9UMS0 254 aa14.67□□□□□ -0.06
TRIM40-207ENST00000396581 SLX4Q8IY92 1834 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 C10orf71Q711Q0 1435 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 MEFVO15553 781 aaPredicted RBP14.66□□□□□ -0.06
TRIM40-207ENST00000396581 BUB1O43683 1085 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 HNRNPH1P31943 449 aaKnown RBP14.66□□□□□ -0.06
TRIM40-207ENST00000396581 HSPA9P38646 679 aaKnown RBP14.66□□□□□ -0.06
TRIM40-207ENST00000396581 NOVP48745 357 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 CDC37Q16543 378 aaPredicted RBP14.66□□□□□ -0.06
TRIM40-207ENST00000396581 TMEM119Q4V9L6 283 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 CACNA2D4Q7Z3S7 1137 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 SH2D3CQ8N5H7 860 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 ANKRD13CQ8N6S4 541 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 RAD54LQ92698 747 aa14.66□□□□□ -0.06
TRIM40-207ENST00000396581 LUC7LQ9NQ29 371 aaKnown RBP14.66□□□□□ -0.06
TRIM40-207ENST00000396581 GOLGB1Q14789 3259 aaKnown RBP14.66□□□□□ -0.06
TRIM40-207ENST00000396581 hCG_1984214I3L0E3 225 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 EDIL3O43854 480 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 PALMO75781 387 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 PLCG2P16885 1265 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 RASA1P20936 1047 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 SLC18A3Q16572 532 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 SFMBT2Q5VUG0 894 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
TRIM40-207ENST00000396581 ZNF713Q8N859 430 aaPredicted RBP14.65□□□□□ -0.06
TRIM40-207ENST00000396581 CASKIN2Q8WXE0 1202 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 AIPL1Q9NZN9 384 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 SAMM50Q9Y512 469 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 COL4A3BPQ9Y5P4 624 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 SNED1Q8TER0 1413 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 ATAD5Q96QE3 1844 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 HMGB1P1B2RPK0 211 aaPredicted RBP14.65□□□□□ -0.06
TRIM40-207ENST00000396581 PPP1R37O75864 691 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 NR1D1P20393 614 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 NAP1L1P55209 391 aaKnown RBP14.65□□□□□ -0.06
TRIM40-207ENST00000396581 FKBP3Q00688 224 aaKnown RBP14.65□□□□□ -0.06
TRIM40-207ENST00000396581 GUCY2DQ02846 1103 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 SEPT2Q15019 361 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 FAM83BQ5T0W9 1011 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 TTC19Q6DKK2 380 aaPredicted RBP14.65□□□□□ -0.06
TRIM40-207ENST00000396581 LRIG3Q6UXM1 1119 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 ATP6V1G3Q96LB4 118 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 CEP63Q96MT8 703 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 TSG101Q99816 390 aa14.65□□□□□ -0.06
TRIM40-207ENST00000396581 ZSCAN5CA6NGD5 496 aaPredicted RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 KLRC1P26715 233 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 USP8P40818 1118 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 BTDP43251 543 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 PTGISQ16647 500 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 NAA35Q5VZE5 725 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 ZC3H3Q8IXZ2 948 aaKnown RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 CERS5Q8N5B7 392 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 DDX12PQ92771 950 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 NAV1Q8NEY1 1877 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 GOLGA8HP0CJ92 632 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 MDH1P40925 334 aaKnown RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 TXKP42681 527 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 RHBDL3P58872 404 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 IRX3P78415 501 aaPredicted RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 PDE4CQ08493 712 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 CALCRLQ16602 461 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 TDRD12Q587J7 1177 aaKnown RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 KCTD16Q68DU8 428 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 PPP4R3AQ6IN85 833 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 MICALCLQ6ZW33 695 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 DYMQ7RTS9 669 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 REXO1Q8N1G1 1221 aaKnown RBP14.64□□□□□ -0.07
TRIM40-207ENST00000396581 TGFBRAP1Q8WUH2 860 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 DNAJC19Q96DA6 116 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 NCAPGQ9BPX3 1015 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 RIOX1Q9H6W3 641 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 PLCB1Q9NQ66 1216 aa14.64□□□□□ -0.07
TRIM40-207ENST00000396581 ATP8B3O60423 1300 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 G3V3G9 751 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 GNA14O95837 355 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 ATP1A2P50993 1020 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 GSCP56915 257 aaPredicted RBP14.63□□□□□ -0.07
TRIM40-207ENST00000396581 TMEM266Q2M3C6 531 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 GRIPAP1Q4V328 841 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 FBXW10Q5XX13 1052 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 TRIM59Q8IWR1 403 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 MYOCDQ8IZQ8 938 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 NEDD1Q8NHV4 660 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 ZNF473Q8WTR7 871 aaKnown RBP14.63□□□□□ -0.07
TRIM40-207ENST00000396581 KRT12Q99456 494 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 RAB34Q9BZG1 259 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 ISCUQ9H1K1 167 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 RABEP2Q9H5N1 569 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 TMBIM4Q9HC24 238 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 STX8Q9UNK0 236 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 DAGLAQ9Y4D2 1042 aa14.63□□□□□ -0.07
TRIM40-207ENST00000396581 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms