RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 TRIM59Q8IWR1 403 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 ERMNQ8TAM6 284 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
TRIM39-205ENST00000396551 ZHX3Q9H4I2 956 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 ARFGAP3Q9NP61 516 aa18.32■□□□□ 0.52
TRIM39-205ENST00000396551 IGLV3-22A0A075B6J6 115 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 NOL4O94818 638 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 LCA5LO95447 670 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 RXRBP28702 533 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 KIF11P52732 1056 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 UTP14CQ5TAP6 766 aaKnown RBP18.31■□□□□ 0.52
TRIM39-205ENST00000396551 NEK11Q8NG66 645 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 FAM151AQ8WW52 585 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 REEP2Q9BRK0 252 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 ARHGEF10LQ9HCE6 1279 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 TMOD2Q9NZR1 351 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 EML1O00423 815 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 SRGAP2O75044 1071 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 BRD3Q15059 726 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 SLC30A10Q6XR72 485 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 FUT8Q9BYC5 575 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 ZBTB21Q9ULJ3 1066 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 DNM3Q9UQ16 869 aa18.31■□□□□ 0.52
TRIM39-205ENST00000396551 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
TRIM39-205ENST00000396551 RHOXF2BP0C7M4 288 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 CYP4A11Q02928 519 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
TRIM39-205ENST00000396551 EHBP1Q8NDI1 1231 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 RHOXF2Q9BQY4 288 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 MACROD2A1Z1Q3 448 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
TRIM39-205ENST00000396551 HOXD13P35453 343 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 SFR1Q86XK3 245 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 SAR1BQ9Y6B6 198 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 KIF5AQ12840 1032 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 SPA17Q15506 151 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 LONRF2Q1L5Z9 754 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 HGSNATQ68CP4 663 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 CAMKK2Q96RR4 588 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 EDEM3Q9BZQ6 932 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 UBXN6Q9BZV1 441 aa18.3■□□□□ 0.52
TRIM39-205ENST00000396551 APBA1Q02410 837 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 DLGAP5Q15398 846 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 ASTE1Q2TB18 679 aaPredicted RBP18.29■□□□□ 0.52
TRIM39-205ENST00000396551 EPM2AIP1Q7L775 607 aaPredicted RBP18.29■□□□□ 0.52
TRIM39-205ENST00000396551 EIF2AK1Q9BQI3 630 aaKnown RBP18.29■□□□□ 0.52
TRIM39-205ENST00000396551 RGL1Q9NZL6 768 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 MYH10P35580 1976 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 RSPH10B2B2RC85 870 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 POTEB2H3BUK9 544 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 GNA14O95837 355 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 RSPH10BP0C881 870 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 ZNF76P36508 570 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 ADAM9Q13443 819 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 IFIH1Q9BYX4 1025 aaKnown RBP18.29■□□□□ 0.52
TRIM39-205ENST00000396551 NLRC4Q9NPP4 1024 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 ZNF277Q9NRM2 450 aaPredicted RBP18.29■□□□□ 0.52
TRIM39-205ENST00000396551 STK32BQ9NY57 414 aa18.29■□□□□ 0.52
TRIM39-205ENST00000396551 CFBP00751 764 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 TUBB4BP68371 445 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 EDRF1Q3B7T1 1238 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 CACNA2D4Q7Z3S7 1137 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 SECISBP2LQ93073 1101 aaKnown RBP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 POLR3CQ9BUI4 534 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 RUSC1Q9BVN2 902 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 SH2D4AQ9H788 454 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 MLXIPQ9HAP2 919 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 CEP72Q9P209 647 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 TLR2O60603 784 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 KIF20AO95235 890 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 TERF2Q15554 542 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 TSGA10Q9BZW7 698 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 RANBP17Q9H2T7 1088 aaKnown RBP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 POLD4Q9HCU8 107 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 GOPCQ9HD26 462 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 CAPN6Q9Y6Q1 641 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 MYBP10242 640 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 BEND6Q5SZJ8 279 aaPredicted RBP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 HNRNPLLQ8WVV9 542 aaKnown RBP18.28■□□□□ 0.52
TRIM39-205ENST00000396551 TMEM39BQ9GZU3 492 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 BHMT2Q9H2M3 363 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 PRDM4Q9UKN5 801 aa18.28■□□□□ 0.52
TRIM39-205ENST00000396551 VSNL1P62760 191 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
TRIM39-205ENST00000396551 LARGE2Q8N3Y3 721 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 PSMD1Q99460 953 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 DEF6Q9H4E7 631 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 TRAF3IP3Q9Y228 551 aa18.27■□□□□ 0.52
TRIM39-205ENST00000396551 ANO9A1A5B4 782 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms