RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 PWP2Q15269 919 aaKnown RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 DNAJC19Q96DA6 116 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 DYNLL2Q96FJ2 89 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.53□□□□□ -0.88
BDNF-204ENST00000395980 PGRMC1O00264 195 aaKnown RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 CDR1P51861 262 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 GSTO1P78417 241 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 RAPGEF1Q13905 1077 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 UAP1Q16222 522 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 LACTB2Q53H82 288 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 HYIQ5T013 277 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 SEC14L1Q92503 715 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 SNED1Q8TER0 1413 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 KDM3AQ9Y4C1 1321 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 PPP2R2AP63151 447 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 NEDD9Q14511 834 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 WLSQ5T9L3 541 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 LRRC57Q8N9N7 239 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.53□□□□□ -0.88
BDNF-204ENST00000395980 CNOT10Q9H9A5 744 aaKnown RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 SLC40A1Q9NP59 571 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 TAF1P21675 1872 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 A0A0A6YYK5 440 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 KCNK3O14649 394 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 BAG3O95817 575 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 CTNNA1P35221 906 aaKnown RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 EDRF1Q3B7T1 1238 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 KLHL7Q8IXQ5 586 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 RASGEF1CQ8N431 466 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 CELF1Q92879 486 aaKnown RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 ZKSCAN4Q969J2 545 aaPredicted RBP9.53□□□□□ -0.88
BDNF-204ENST00000395980 RIOX1Q9H6W3 641 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 INTUQ9ULD6 942 aa9.53□□□□□ -0.88
BDNF-204ENST00000395980 MYH4Q9Y623 1939 aa9.52□□□□□ -0.88
BDNF-204ENST00000395980 LOC102724428A0A0B4J2F2 783 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 KIF1CO43896 1103 aaKnown RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 GHRP10912 638 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 KLRK1P26718 216 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 NOVP48745 357 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 SIK1P57059 783 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 IFFO1Q0D2I5 559 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 LMBR1Q8WVP7 490 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 DDX20Q9UHI6 824 aaKnown RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 HPDP32754 393 aaPredicted RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 PRKCIP41743 596 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 EIF3BP55884 814 aaKnown RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 RPS8P62241 208 aaKnown RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 GPATCH11Q8N954 259 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 CENPTQ96BT3 561 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.52□□□□□ -0.89
BDNF-204ENST00000395980 NT5C3AQ9H0P0 336 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 FAM114A2Q9NRY5 505 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 ADAMTS1Q9UHI8 967 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 NENFQ9UMX5 172 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 DDX60LQ5H9U9 1706 aaKnown RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 IRS2Q9Y4H2 1338 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 A0A0G2JS52 829 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 GOLGA8HP0CJ92 632 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 NPEPPSP55786 919 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 LRRC41Q15345 812 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 TRADDQ15628 312 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 SLFN11Q7Z7L1 901 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 CACNA2D3Q8IZS8 1091 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 CCDC26Q8TAB7 109 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 PPANQ9NQ55 473 aaKnown RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 SUCLA2Q9P2R7 463 aaPredicted RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 BIN2Q9UBW5 565 aaPredicted RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
BDNF-204ENST00000395980 TTC7AQ9ULT0 858 aaPredicted RBP9.52□□□□□ -0.89
BDNF-204ENST00000395980 ZNF831Q5JPB2 1677 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 COL5A3P25940 1745 aaPredicted RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 SLC37A4O43826 429 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 LDHCP07864 332 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 ADCY7P51828 1080 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 ANKRD20A8PQ5CZ79 823 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 C16orf86Q6ZW13 317 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 TATDN2Q93075 761 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 PACSIN1Q9BY11 444 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 MCM8Q9UJA3 840 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms