RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 TMEM119Q4V9L6 283 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 CCDC62Q6P9F0 684 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 RBM43Q6ZSC3 357 aaKnown RBP9.91□□□□□ -0.82
CCR9-203ENST00000395963 CDK5RAP3Q96JB5 506 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 TIPINQ9BVW5 301 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 KATNBL1Q9H079 304 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 TNMDQ9H2S6 317 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 JPH1Q9HDC5 661 aaPredicted RBP9.91□□□□□ -0.82
CCR9-203ENST00000395963 SLC9A2Q9UBY0 812 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 SRRDQ9UH36 339 aa9.91□□□□□ -0.82
CCR9-203ENST00000395963 P4HBP07237 508 aaKnown RBP9.9□□□□□ -0.82
CCR9-203ENST00000395963 MSNP26038 577 aaKnown RBP9.9□□□□□ -0.82
CCR9-203ENST00000395963 CEP57L1Q8IYX8 460 aa9.9□□□□□ -0.82
CCR9-203ENST00000395963 ATP6V0A1Q93050 837 aa9.9□□□□□ -0.82
CCR9-203ENST00000395963 CLSTN2Q9H4D0 955 aa9.9□□□□□ -0.82
CCR9-203ENST00000395963 WBP1LQ9NX94 342 aa9.9□□□□□ -0.82
CCR9-203ENST00000395963 DDX41Q9UJV9 622 aaKnown RBP9.9□□□□□ -0.82
CCR9-203ENST00000395963 EMSYQ7Z589 1322 aa9.9□□□□□ -0.82
CCR9-203ENST00000395963 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.83
CCR9-203ENST00000395963 TRPA1O75762 1119 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 PSAPP07602 524 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 SNW1Q13573 536 aaKnown RBP9.9□□□□□ -0.83
CCR9-203ENST00000395963 ACVR2BQ13705 512 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 MIS18BP1Q6P0N0 1132 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 MIER3Q7Z3K6 550 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 GAS2L3Q86XJ1 694 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 EXOC8Q8IYI6 725 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 GPT2Q8TD30 523 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 AFAP1L1Q8TED9 768 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 SNX29Q8TEQ0 813 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 TRIM47Q96LD4 638 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 NUP62CLQ9H1M0 184 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 PCDHA10Q9Y5I2 948 aa9.9□□□□□ -0.83
CCR9-203ENST00000395963 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 ZNF202O95125 648 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 GH1P01241 217 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 HOXD8P13378 290 aaPredicted RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 UBXN2AP68543 259 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 ITGB3BPQ13352 177 aaPredicted RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 E2F4Q16254 413 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 DUSP28Q4G0W2 176 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 CELF3Q5SZQ8 465 aaKnown RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 RRAGBQ5VZM2 374 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 TAPT1Q6NXT6 567 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 KRBA2Q6ZNG9 492 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 C4orf19Q8IY42 314 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 NPLOC4Q8TAT6 608 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 FAM167AQ96KS9 214 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 CLIC6Q96NY7 704 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 HSD17B14Q9BPX1 270 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 ZSWIM4Q9H7M6 989 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 IGKV6D-21A0A0A0MT36 114 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 MSCO60682 206 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 PEX10O60683 326 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 KPNA6O60684 536 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 CAVIN2O95810 425 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 SNAI1O95863 264 aaPredicted RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 SCP2P22307 547 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 UBA1P22314 1058 aaKnown RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 STAT6P42226 847 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 NDUFA8P51970 172 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 DMTNQ08495 405 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 CT47A1Q5JQC4 288 aaPredicted RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 FAM160B1Q5W0V3 765 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 TRIML1Q8N9V2 468 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 CYP2W1Q8TAV3 490 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 NACC1Q96RE7 527 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 UNC45AQ9H3U1 944 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 ANKEF1Q9NU02 776 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 DACT1Q9NYF0 836 aa9.89□□□□□ -0.83
CCR9-203ENST00000395963 DBR1Q9UK59 544 aaKnown RBP9.89□□□□□ -0.83
CCR9-203ENST00000395963 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 FARP2O94887 1054 aaPredicted RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 TBC1D8O95759 1140 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 HMGCRP04035 888 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 AKR1A1P14550 325 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 CCT6AP40227 531 aaKnown RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 PPP1R2P41236 205 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 QARSP47897 775 aaKnown RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 PSMC5P62195 406 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 NCAPH2Q6IBW4 605 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 SH3RF1Q7Z6J0 888 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 CNNM3Q8NE01 707 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 RASSF8Q8NHQ8 419 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 SEPT1Q8WYJ6 367 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 EIF2AK1Q9BQI3 630 aaKnown RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 MMTAG2Q9BU76 263 aaKnown RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 GOLPH3LQ9H4A5 285 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 KCNG1Q9UIX4 513 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 FAM184BQ9ULE4 1060 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 A0A1B0GVL5 298 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 ACTN4O43707 911 aaKnown RBP9.88□□□□□ -0.83
CCR9-203ENST00000395963 LGR5O75473 907 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 SMC2O95347 1197 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 SUPT20HL2P0C7V6 817 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 ABHD15Q6UXT9 468 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 PLPPR4Q7Z2D5 763 aa9.88□□□□□ -0.83
CCR9-203ENST00000395963 PPTC7Q8NI37 304 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms