RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CATSPER3Q86XQ3 398 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 LARP4BQ92615 738 aaKnown RBP15.32■□□□□ 0.04
VAPB-202ENST00000395802 PAGE5Q96GU1 130 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 APBA2Q99767 749 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 HSD17B14Q9BPX1 270 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 FUCA2Q9BTY2 467 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 RNF186Q9NXI6 227 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 KIAA1024Q9UPX6 916 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 PCDHA10Q9Y5I2 948 aa15.32■□□□□ 0.04
VAPB-202ENST00000395802 DDX39AO00148 427 aaKnown RBP15.31■□□□□ 0.04
VAPB-202ENST00000395802 TRPA1O75762 1119 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 GNRH1P01148 92 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 XRCC6P12956 609 aaKnown RBP eCLIP15.31■□□□□ 0.04
VAPB-202ENST00000395802 PSMC4P43686 418 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 GRB10Q13322 594 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 TMEM119Q4V9L6 283 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 CKAP2LQ8IYA6 745 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
VAPB-202ENST00000395802 BEGAINQ9BUH8 593 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 GTPBP4Q9BZE4 634 aaKnown RBP15.31■□□□□ 0.04
VAPB-202ENST00000395802 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 KBTBD4Q9NVX7 518 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
VAPB-202ENST00000395802 PSAPP07602 524 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 XRCC5P13010 732 aaKnown RBP15.31■□□□□ 0.04
VAPB-202ENST00000395802 MIS18BP1Q6P0N0 1132 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 METTL7BQ6UX53 244 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 EEPD1Q7L9B9 569 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 SH3RF1Q7Z6J0 888 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
VAPB-202ENST00000395802 RAD54LQ92698 747 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 ATP6V0A1Q93050 837 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 SMARCE1Q969G3 411 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 NACC1Q96RE7 527 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 TSPY26PQ9H489 355 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 RMND1Q9NWS8 449 aa15.31■□□□□ 0.04
VAPB-202ENST00000395802 EML1O00423 815 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 GTPBP6O43824 516 aaPredicted RBP15.3■□□□□ 0.04
VAPB-202ENST00000395802 SLITRK3O94933 977 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 QARSP47897 775 aaKnown RBP15.3■□□□□ 0.04
VAPB-202ENST00000395802 MAP2K1Q02750 393 aaPredicted RBP15.3■□□□□ 0.04
VAPB-202ENST00000395802 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 TPH2Q8IWU9 490 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 FBXO16Q8IX29 292 aaPredicted RBP15.3■□□□□ 0.04
VAPB-202ENST00000395802 TRIML1Q8N9V2 468 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 USP6NLQ92738 828 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 PNMA5Q96PV4 448 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 GSDMAQ96QA5 445 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 PLIN2Q99541 437 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 RBSNQ9H1K0 784 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 DDX41Q9UJV9 622 aaKnown RBP15.3■□□□□ 0.04
VAPB-202ENST00000395802 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
VAPB-202ENST00000395802 POTEB3A0JP26 581 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.043e-6■■□□□ 12
VAPB-202ENST00000395802 MED24O75448 989 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 SPATA31C1P0DKV0 1188 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 TXNP10599 105 aaKnown RBP15.29■□□□□ 0.04
VAPB-202ENST00000395802 UBA1P22314 1058 aaKnown RBP15.29■□□□□ 0.04
VAPB-202ENST00000395802 AFMP43652 599 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 PSMC5P62195 406 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
VAPB-202ENST00000395802 CYP4A11Q02928 519 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 NT5DC1Q5TFE4 455 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 POTEBQ6S5H4 581 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 CYFIP1Q7L576 1253 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 LXNQ9BS40 222 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 ANO10Q9NW15 660 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 TUBE1Q9UJT0 475 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 GJD2Q9UKL4 321 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 RBM47A0AV96 593 aaKnown RBP15.29■□□□□ 0.04
VAPB-202ENST00000395802 HSPA6P17066 643 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 PNOCQ13519 176 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 IQSEC1Q6DN90 963 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 DYDC2Q96IM9 177 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
VAPB-202ENST00000395802 KCND2Q9NZV8 630 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
VAPB-202ENST00000395802 KIAA1217Q5T5P2 1943 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
VAPB-202ENST00000395802 FARP2O94887 1054 aaPredicted RBP15.28■□□□□ 0.04
VAPB-202ENST00000395802 LYPLA2O95372 231 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 GGPS1O95749 300 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 CYP2B6P20813 491 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 ACTR2P61160 394 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 SP2Q02086 613 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 ACVR2BQ13705 512 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 LAMC2Q13753 1193 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 STX1AQ16623 288 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 DHX37Q8IY37 1157 aaKnown RBP15.28■□□□□ 0.04
VAPB-202ENST00000395802 C4orf19Q8IY42 314 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 NPLOC4Q8TAT6 608 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 SPATA20Q8TB22 786 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 ERO1AQ96HE7 468 aa15.28■□□□□ 0.04
VAPB-202ENST00000395802 CCDC43Q96MW1 224 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms