RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 TYW1BQ6NUM6 668 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 LRRC55Q6ZSA7 311 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 PARP9Q8IXQ6 854 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 GSPT2Q8IYD1 628 aaKnown RBP5.57□□□□□ -1.52
FGD4-201ENST00000395740 CACNA2D3Q8IZS8 1091 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 SYCE1Q8N0S2 351 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 FUKQ8N0W3 1084 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 CCDC82Q8N4S0 544 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 KIAA0895Q8NCT3 520 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 CCDC26Q8TAB7 109 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 TAF4BQ92750 862 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 TATDN2Q93075 761 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 TLCD1Q96CP7 247 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 MTMR8Q96EF0 704 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 DDX27Q96GQ7 796 aaKnown RBP5.57□□□□□ -1.52
FGD4-201ENST00000395740 MS4A4AQ96JQ5 239 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 FAM210AQ96ND0 272 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 PLCD4Q9BRC7 762 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 MXD3Q9BW11 206 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 MLXIPQ9HAP2 919 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 VEZTQ9HBM0 779 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 SLC40A1Q9NP59 571 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.57□□□□□ -1.52
FGD4-201ENST00000395740 SUCLA2Q9P2R7 463 aaPredicted RBP5.57□□□□□ -1.52
FGD4-201ENST00000395740 NFU1Q9UMS0 254 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 NENFQ9UMX5 172 aa5.57□□□□□ -1.52
FGD4-201ENST00000395740 COL5A3P25940 1745 aaPredicted RBP5.57□□□□□ -1.52
FGD4-201ENST00000395740 COL14A1Q05707 1796 aaKnown RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 STXBP3O00186 592 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 NUDT17P0C025 328 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 KCNQ4P56696 695 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 ASIC1P78348 528 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 KCNMA1Q12791 1236 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 TCEAL1Q15170 157 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 NONOQ15233 471 aaKnown RBP eCLIP5.56□□□□□ -1.52
FGD4-201ENST00000395740 EDRF1Q3B7T1 1238 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 ANKRD20A8PQ5CZ79 823 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 PPP1R18Q6NYC8 613 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 BTNL9Q6UXG8 535 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 PTF1AQ7RTS3 328 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 FBXO33Q7Z6M2 555 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 NEK8Q86SG6 692 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 APLFQ8IW19 511 aaPredicted RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 STAG2Q8N3U4 1231 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 PSMD1Q99460 953 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 TMEM60Q9H2L4 133 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 PLEKHA4Q9H4M7 779 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 ZNF287Q9HBT7 754 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 C6orf50Q9HD87 102 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 CNOT7Q9UIV1 285 aaKnown RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 PLAAQ9Y263 795 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 COL4A3BPQ9Y5P4 624 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 NHSQ6T4R5 1651 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 LOXHD1Q8IVV2 1947 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 FAM205AQ6ZU69 1335 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 FAM187AA6NFU0 413 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 PES1O00541 588 aaKnown RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 LIN7AO14910 233 aaPredicted RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 PPFIA2O75334 1257 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 KIF4AO95239 1232 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 HSPA6P17066 643 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 ECHS1P30084 290 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 NF2P35240 595 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 GUCY2DQ02846 1103 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 BYSLQ13895 437 aaKnown RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 RPS6KA1Q15418 735 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 TMEM266Q2M3C6 531 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 CAVIN4Q5BKX8 364 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 GKAP1Q5VSY0 366 aaPredicted RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 SPTY2D1Q68D10 685 aaPredicted RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 TLDC1Q6P9B6 456 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 SMIM5Q71RC9 77 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 RRAGAQ7L523 313 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 KRT26Q7Z3Y9 468 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 HOOK3Q86VS8 718 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 DZIP3Q86Y13 1208 aaKnown RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 SYNE4Q8N205 404 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 CCT6BQ92526 530 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 MIEF2Q96C03 454 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 PGM2Q96G03 612 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 SEC16BQ96JE7 1060 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 CCDC114Q96M63 670 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 C8orf37Q96NL8 207 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 MTMR9Q96QG7 549 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 NAP1L3Q99457 506 aaPredicted RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.56□□□□□ -1.527e-9■■■■■ 42.7
FGD4-201ENST00000395740 TXLNGYQ9BZA5 131 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 DCP1AQ9NPI6 582 aaPredicted RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 DDX20Q9UHI6 824 aaKnown RBP5.56□□□□□ -1.52
FGD4-201ENST00000395740 MAD2L2Q9UI95 211 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 SAMM50Q9Y512 469 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 COL24A1Q17RW2 1714 aa5.56□□□□□ -1.52
FGD4-201ENST00000395740 KDM3AQ9Y4C1 1321 aa5.55□□□□□ -1.52
FGD4-201ENST00000395740 GTPBP10A4D1E9 387 aaKnown RBP5.55□□□□□ -1.52
FGD4-201ENST00000395740 C19orf67A6NJJ6 358 aa5.55□□□□□ -1.52
FGD4-201ENST00000395740 E7EVH7 732 aa5.55□□□□□ -1.52
FGD4-201ENST00000395740 PGRMC1O00264 195 aaKnown RBP5.55□□□□□ -1.52
FGD4-201ENST00000395740 PPIP5K2O43314 1243 aa5.55□□□□□ -1.52
FGD4-201ENST00000395740 KCNQ2O43526 872 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms