RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GCOM1H8Y6P7 765 aaPredicted RBP18.35■□□□□ 0.53
SNCA-205ENST00000394991 NOP56O00567 594 aaKnown RBP18.35■□□□□ 0.53
SNCA-205ENST00000394991 CSPG5O95196 566 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 CHRNA1P02708 482 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 POLR2MP0CAP2 368 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 SMAD4Q13485 552 aaKnown RBP18.35■□□□□ 0.53
SNCA-205ENST00000394991 SEC23AQ15436 765 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 METTL7BQ6UX53 244 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 CLP1Q92989 425 aaKnown RBP18.35■□□□□ 0.53
SNCA-205ENST00000394991 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
SNCA-205ENST00000394991 PALM3A6NDB9 673 aaPredicted RBP18.34■□□□□ 0.53
SNCA-205ENST00000394991 GHRP10912 638 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 GNAT1P11488 350 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 ICAM3P32942 547 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 CAMK1Q14012 370 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 IFIT1BQ5T764 474 aaKnown RBP18.34■□□□□ 0.53
SNCA-205ENST00000394991 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
SNCA-205ENST00000394991 RUFY4Q6ZNE9 571 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 CYFIP1Q7L576 1253 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 PRSS33Q8NF86 280 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 MFSD14AQ96MC6 490 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 INPP4AQ96PE3 977 aaPredicted RBP18.34■□□□□ 0.53
SNCA-205ENST00000394991 PIGSQ96S52 555 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 POP1Q99575 1024 aaKnown RBP18.34■□□□□ 0.53
SNCA-205ENST00000394991 UBAC1Q9BSL1 405 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 EHMT1Q9H9B1 1298 aa18.34■□□□□ 0.53
SNCA-205ENST00000394991 MMP1P03956 469 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 MGAT3Q09327 533 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 HDAC1Q13547 482 aaPredicted RBP18.33■□□□□ 0.52
SNCA-205ENST00000394991 UTP14CQ5TAP6 766 aaKnown RBP18.33■□□□□ 0.52
SNCA-205ENST00000394991 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 ZNF689Q96CS4 500 aaPredicted RBP18.33■□□□□ 0.52
SNCA-205ENST00000394991 KRT23Q9C075 422 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 IGFLR1Q9H665 355 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 CD207Q9UJ71 328 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 RWDD3Q9Y3V2 267 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 CACNA1HO95180 2353 aa18.33■□□□□ 0.52
SNCA-205ENST00000394991 SPATA31C2B4DYI2 1134 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 STXBP3O00186 592 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 CYTH3O43739 400 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 NEDD9Q14511 834 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 LPIN1Q14693 890 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 GNPTABQ3T906 1256 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 EDAQ92838 391 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 RIOX1Q9H6W3 641 aa18.32■□□□□ 0.52
SNCA-205ENST00000394991 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
SNCA-205ENST00000394991 ENPP3O14638 875 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 DNAJB1P25685 340 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 SP4Q02446 784 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 ADAM15Q13444 863 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 GRM4Q14833 912 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
SNCA-205ENST00000394991 LINC01599Q8WXQ3 324 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 MSLNLQ96KJ4 702 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
SNCA-205ENST00000394991 RTEL1Q9NZ71 1219 aa18.31■□□□□ 0.52
SNCA-205ENST00000394991 NRCAMQ92823 1304 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 FIBPO43427 364 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 DGKIO75912 1065 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 BTG3Q14201 252 aaPredicted RBP18.3■□□□□ 0.52
SNCA-205ENST00000394991 IER5LQ5T953 404 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 BMP8AQ7Z5Y6 402 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 ADGRD2Q7Z7M1 963 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 PLAGL2Q9UPG8 496 aa18.3■□□□□ 0.52
SNCA-205ENST00000394991 MRPL42Q9Y6G3 142 aaKnown RBP18.3■□□□□ 0.52
SNCA-205ENST00000394991 STAM2O75886 525 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 EYA4O95677 639 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 NDUFV1P49821 464 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 FBXO47Q5MNV8 452 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 PLEKHM2Q8IWE5 1019 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 SNX27Q96L92 541 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 PLVAPQ9BX97 442 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 IL25Q9H293 177 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 SENP2Q9HC62 589 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 CLEC1BQ9P126 229 aa18.29■□□□□ 0.52
SNCA-205ENST00000394991 FNDC1Q4ZHG4 1894 aaPredicted RBP18.29■□□□□ 0.52
SNCA-205ENST00000394991 PNMA6FA0A0J9YX94 578 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 TMEM221A6NGB7 291 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 M0R296 226 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 ITGB1P05556 798 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
SNCA-205ENST00000394991 TAF2Q6P1X5 1199 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 TRIM67Q6ZTA4 783 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 P2RX5Q93086 422 aa18.28■□□□□ 0.52
SNCA-205ENST00000394991 AGO3Q9H9G7 860 aaKnown RBP18.28■□□□□ 0.52
SNCA-205ENST00000394991 USP34Q70CQ2 3546 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 LOC730098B7Z3J9 87 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 GLP2RO95838 553 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 TCF7P36402 384 aaPredicted RBP18.27■□□□□ 0.52
SNCA-205ENST00000394991 TRAF1Q13077 416 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 PPFIA1Q13136 1202 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 MARCH8Q5T0T0 291 aa18.27■□□□□ 0.52
SNCA-205ENST00000394991 RTN4RL1Q86UN2 441 aaPredicted RBP18.27■□□□□ 0.52
SNCA-205ENST00000394991 CRIPAKQ8N1N5 446 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms