RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 CD109Q6YHK3 1445 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 NEMP1O14524 444 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 DIAPH2O60879 1101 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 ANGPT1Q15389 498 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 NOSTRINQ8IVI9 506 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 RNF139Q8WU17 664 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
SIN3A-202ENST00000394947 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
SIN3A-202ENST00000394947 SNX2O60749 519 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 MYL3P08590 195 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 GUCY2CP25092 1073 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 DNAJC24Q6P3W2 148 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 LVRNQ6Q4G3 990 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 TRIM55Q9BYV6 548 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 CLCA2Q9UQC9 943 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 CENPAP49450 140 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 PSMD2Q13200 908 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 UBE2SQ16763 222 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 NAF1Q96HR8 494 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 PPARGC1AQ9UBK2 798 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 ARL8AQ96BM9 186 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 ZBED2Q9BTP6 218 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 NRBP2Q9NSY0 501 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 TTC7AQ9ULT0 858 aaPredicted RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 N4BP1O75113 896 aaKnown RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
SIN3A-202ENST00000394947 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 TTC1Q99614 292 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
SIN3A-202ENST00000394947 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 KIAA2013Q8IYS2 634 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 FAM49AQ9H0Q0 323 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 HEY1Q9Y5J3 304 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 IFNL3Q8IZI9 196 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 COA7Q96BR5 231 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 ANGPTL2Q9UKU9 493 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 KCNQ4P56696 695 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 MAP3K7CLP57077 242 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 DSTYKQ6XUX3 929 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 KBTBD3Q8NAB2 608 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 GJC2Q5T442 439 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 SLC26A7Q8TE54 656 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 AP5M1Q9H0R1 490 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 DCTN4Q9UJW0 460 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 ASZ1Q8WWH4 475 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 GGT7Q9UJ14 662 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 ZNF229Q9UJW7 825 aa13.18□□□□□ -0.3
SIN3A-202ENST00000394947 FBXO2Q9UK22 296 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-202ENST00000394947 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
SIN3A-202ENST00000394947 KRT17Q04695 432 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 KLC3Q6P597 504 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GIPC2Q8TF65 315 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 PYROXD1Q8WU10 500 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 TSC22D3Q99576 134 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 ADGRL1O94910 1474 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 TNKSO95271 1327 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GCNAQ96QF7 691 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 VPS11Q9H270 941 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GCP02774 474 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 PCYT1AP49585 367 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 TMPRSS15P98073 1019 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 SLC13A1Q9BZW2 595 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GOLGA8QA0A0J9YX86 632 aa13.17□□□□□ -0.3
SIN3A-202ENST00000394947 GOLGA8OA6NCC3 632 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms